RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 MON2Q7Z3U7 1717 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 PIK3C2AO00443 1686 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 BCL9LQ86UU0 1499 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 ZNF772Q68DY9 489 aaPredicted RBP7.84□□□□□ -1.15
USP46-206ENST00000506707 UNC5CLQ8IV45 518 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 QTRT2Q9H974 415 aaKnown RBP7.84□□□□□ -1.15
USP46-206ENST00000506707 BTG4Q9NY30 223 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 USP21Q9UK80 565 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 AXIN2Q9Y2T1 843 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 SLIT3O75094 1523 aa7.83□□□□□ -1.16
USP46-206ENST00000506707 SLIT2O94813 1529 aa7.83□□□□□ -1.16
USP46-206ENST00000506707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP46-206ENST00000506707 AATKQ6ZMQ8 1374 aa7.83□□□□□ -1.16
USP46-206ENST00000506707 ZNF316A6NFI3 1004 aaPredicted RBP7.82□□□□□ -1.16
USP46-206ENST00000506707 DDX10Q13206 875 aaKnown RBP7.82□□□□□ -1.16
USP46-206ENST00000506707 RRS1Q15050 365 aaKnown RBP7.82□□□□□ -1.16
USP46-206ENST00000506707 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 CRYBG1Q9Y4K1 1723 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 VPS72Q15906 364 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 IP6K1Q92551 441 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 GJD4Q96KN9 370 aaPredicted RBP7.81□□□□□ -1.16
USP46-206ENST00000506707 TRPC5Q9UL62 973 aaPredicted RBP7.81□□□□□ -1.16
USP46-206ENST00000506707 NFAT5O94916 1531 aa7.81□□□□□ -1.16
USP46-206ENST00000506707 CAMTA1Q9Y6Y1 1673 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 RXRBP28702 533 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 TNNT2P45379 298 aaPredicted RBP7.8□□□□□ -1.16
USP46-206ENST00000506707 EVA1CP58658 441 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 GSE1Q14687 1217 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
USP46-206ENST00000506707 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
USP46-206ENST00000506707 ILDR2Q71H61 639 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
USP46-206ENST00000506707 STRN4Q9NRL3 753 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 POLKQ9UBT6 870 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 NSD2O96028 1365 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 NPC1L1Q9UHC9 1359 aa7.8□□□□□ -1.16
USP46-206ENST00000506707 MARF1Q9Y4F3 1742 aaKnown RBP7.8□□□□□ -1.16
USP46-206ENST00000506707 ATRNO75882 1429 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 PHRF1Q9P1Y6 1649 aaKnown RBP7.79□□□□□ -1.16
USP46-206ENST00000506707 ABCA3Q99758 1704 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 ONECUT3O60422 494 aaPredicted RBP7.79□□□□□ -1.16
USP46-206ENST00000506707 HOXC9P31274 260 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 AMPHP49418 695 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
USP46-206ENST00000506707 HSP90AB2PQ58FF8 381 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 EMILIN1Q9Y6C2 1016 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 USP54Q70EL1 1684 aa7.79□□□□□ -1.16
USP46-206ENST00000506707 SPATA31A5Q5VU36 1347 aa7.78□□□□□ -1.16
USP46-206ENST00000506707 SPATA31A7Q8IWB4 1347 aa7.78□□□□□ -1.16
USP46-206ENST00000506707 G3V3G9 751 aa7.78□□□□□ -1.16
USP46-206ENST00000506707 CNGB1Q14028 1251 aaPredicted RBP7.78□□□□□ -1.16
USP46-206ENST00000506707 SPATA31A1Q5TZJ5 1347 aa7.78□□□□□ -1.16
USP46-206ENST00000506707 COL14A1Q05707 1796 aaKnown RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 COL5A2P05997 1499 aaPredicted RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 KIF24Q5T7B8 1368 aa7.77□□□□□ -1.17
USP46-206ENST00000506707 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 HOXB1P14653 301 aaPredicted RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 ZNF710Q8N1W2 664 aa7.77□□□□□ -1.17
USP46-206ENST00000506707 ANKRD24Q8TF21 1146 aa7.77□□□□□ -1.17
USP46-206ENST00000506707 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
USP46-206ENST00000506707 ERBB3P21860 1342 aa7.77□□□□□ -1.17
USP46-206ENST00000506707 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
USP46-206ENST00000506707 COL18A1P39060 1754 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 INSRP06213 1382 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 CSB-PGBD3P0DP91 1061 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 PSEN1P49768 467 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 MTHFSP49914 203 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 BARGINQ6ZT62 677 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 TOM1L2Q6ZVM7 507 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 TCP11L2Q8N4U5 519 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 CARD10Q9BWT7 1032 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 USP35Q9P2H5 1018 aa7.76□□□□□ -1.17
USP46-206ENST00000506707 THRAP3Q9Y2W1 955 aaKnown RBP7.76□□□□□ -1.17
USP46-206ENST00000506707 BLMP54132 1417 aaPredicted RBP7.76□□□□□ -1.17
USP46-206ENST00000506707 RTL1A6NKG5 1358 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 FLT4P35916 1363 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 CHRM1P11229 460 aaPredicted RBP7.75□□□□□ -1.17
USP46-206ENST00000506707 FAM98CQ17RN3 349 aaKnown RBP7.75□□□□□ -1.17
USP46-206ENST00000506707 NBPF6Q5VWK0 638 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 SEPT12Q8IYM1 358 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 LTV1Q96GA3 475 aaPredicted RBP7.75□□□□□ -1.17
USP46-206ENST00000506707 NBPF4Q96M43 638 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 NLRP2Q9NX02 1062 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 BOLA1Q9Y3E2 137 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 CRB1P82279 1406 aa7.75□□□□□ -1.17
USP46-206ENST00000506707 ABCC6O95255 1503 aa7.74□□□□□ -1.17
USP46-206ENST00000506707 PPP2R1AP30153 589 aa7.74□□□□□ -1.17
USP46-206ENST00000506707 EIF4A2Q14240 407 aaKnown RBP7.74□□□□□ -1.17
USP46-206ENST00000506707 DOK7Q18PE1 504 aa7.74□□□□□ -1.17
USP46-206ENST00000506707 FBXO3Q9UK99 471 aa7.74□□□□□ -1.17
USP46-206ENST00000506707 NWD2Q9ULI1 1742 aa7.74□□□□□ -1.17
USP46-206ENST00000506707 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
USP46-206ENST00000506707 GLI3P10071 1580 aa7.73□□□□□ -1.17
USP46-206ENST00000506707 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
USP46-206ENST00000506707 IL13P35225 146 aa7.73□□□□□ -1.17
USP46-206ENST00000506707 EYA1Q99502 592 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms