RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
AP3S1-204ENST00000506430 RAPGEF4Q8WZA2 1011 aa23.86■■□□□ 1.41
AP3S1-204ENST00000506430 PANK3Q9H999 370 aa23.86■■□□□ 1.41
AP3S1-204ENST00000506430 STK32BQ9NY57 414 aa23.86■■□□□ 1.41
AP3S1-204ENST00000506430 KAT6BQ8WYB5 2073 aa23.85■■□□□ 1.41
AP3S1-204ENST00000506430 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
AP3S1-204ENST00000506430 SYTL4Q96C24 671 aaPredicted RBP23.85■■□□□ 1.41
AP3S1-204ENST00000506430 SPON1Q9HCB6 807 aa23.85■■□□□ 1.41
AP3S1-204ENST00000506430 BTAF1O14981 1849 aa23.84■■□□□ 1.41
AP3S1-204ENST00000506430 TATP17735 454 aaPredicted RBP23.83■■□□□ 1.41
AP3S1-204ENST00000506430 TNNT2P45379 298 aaPredicted RBP23.83■■□□□ 1.41
AP3S1-204ENST00000506430 LRRC4BQ9NT99 713 aa23.83■■□□□ 1.41
AP3S1-204ENST00000506430 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
AP3S1-204ENST00000506430 WASHC2AQ641Q2 1341 aa23.82■■□□□ 1.4
AP3S1-204ENST00000506430 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
AP3S1-204ENST00000506430 ZBTB7AO95365 584 aa23.8■■□□□ 1.4
AP3S1-204ENST00000506430 NSD2O96028 1365 aa23.78■■□□□ 1.4
AP3S1-204ENST00000506430 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
AP3S1-204ENST00000506430 KCNQ4P56696 695 aa23.78■■□□□ 1.4
AP3S1-204ENST00000506430 PPP1R1BQ9UD71 204 aaPredicted RBP23.78■■□□□ 1.4
AP3S1-204ENST00000506430 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
AP3S1-204ENST00000506430 EYA1Q99502 592 aa23.77■■□□□ 1.4
AP3S1-204ENST00000506430 ATF5Q9Y2D1 282 aaPredicted RBP23.77■■□□□ 1.4
AP3S1-204ENST00000506430 MAP2P11137 1827 aaKnown RBP23.76■■□□□ 1.39
AP3S1-204ENST00000506430 DOT1LQ8TEK3 1739 aa23.76■■□□□ 1.39
AP3S1-204ENST00000506430 CYP27B1O15528 508 aa23.75■■□□□ 1.39
AP3S1-204ENST00000506430 SLC27A3Q5K4L6 730 aa23.75■■□□□ 1.39
AP3S1-204ENST00000506430 PCDH11XQ9BZA7 1347 aa23.75■■□□□ 1.39
AP3S1-204ENST00000506430 PCDH11YQ9BZA8 1340 aa23.75■■□□□ 1.39
AP3S1-204ENST00000506430 PAPPAQ13219 1627 aa23.74■■□□□ 1.39
AP3S1-204ENST00000506430 ANKRD26Q9UPS8 1709 aa23.74■■□□□ 1.39
AP3S1-204ENST00000506430 PTGER2P43116 358 aa23.73■■□□□ 1.39
AP3S1-204ENST00000506430 EIF4A2Q14240 407 aaKnown RBP23.73■■□□□ 1.39
AP3S1-204ENST00000506430 AKT1S1Q96B36 256 aa23.73■■□□□ 1.39
AP3S1-204ENST00000506430 NCAPD2Q15021 1401 aa23.73■■□□□ 1.39
AP3S1-204ENST00000506430 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
AP3S1-204ENST00000506430 MTFR1LQ9H019 292 aa23.7■■□□□ 1.38
AP3S1-204ENST00000506430 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
AP3S1-204ENST00000506430 MORC1Q86VD1 984 aa23.69■■□□□ 1.38
AP3S1-204ENST00000506430 CCNL1Q9UK58 526 aaPredicted RBP23.69■■□□□ 1.38
AP3S1-204ENST00000506430 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
AP3S1-204ENST00000506430 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
AP3S1-204ENST00000506430 SGIP1Q9BQI5 828 aa23.67■■□□□ 1.38
AP3S1-204ENST00000506430 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
AP3S1-204ENST00000506430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.65■■□□□ 1.38
AP3S1-204ENST00000506430 TFCP2L1Q9NZI6 479 aa23.65■■□□□ 1.38
AP3S1-204ENST00000506430 LY75O60449 1722 aa23.64■■□□□ 1.38
AP3S1-204ENST00000506430 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.38
AP3S1-204ENST00000506430 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.38
AP3S1-204ENST00000506430 AMER1Q5JTC6 1135 aaPredicted RBP23.64■■□□□ 1.37
AP3S1-204ENST00000506430 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
AP3S1-204ENST00000506430 PIGBQ92521 554 aa23.62■■□□□ 1.37
AP3S1-204ENST00000506430 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
AP3S1-204ENST00000506430 PHKG2P15735 406 aa23.61■■□□□ 1.37
AP3S1-204ENST00000506430 PALLDQ8WX93 1383 aa23.61■■□□□ 1.37
AP3S1-204ENST00000506430 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
AP3S1-204ENST00000506430 FHDC1Q9C0D6 1143 aaPredicted RBP23.6■■□□□ 1.37
AP3S1-204ENST00000506430 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
AP3S1-204ENST00000506430 ARXQ96QS3 562 aa23.58■■□□□ 1.37
AP3S1-204ENST00000506430 SYT17Q9BSW7 474 aa23.58■■□□□ 1.37
AP3S1-204ENST00000506430 AEBP1Q8IUX7 1158 aa23.57■■□□□ 1.36
AP3S1-204ENST00000506430 SLC16A10Q8TF71 515 aa23.57■■□□□ 1.36
AP3S1-204ENST00000506430 COL23A1Q86Y22 540 aaPredicted RBP23.56■■□□□ 1.36
AP3S1-204ENST00000506430 SMARCC1Q92922 1105 aaPredicted RBP23.56■■□□□ 1.36
AP3S1-204ENST00000506430 ITGB4P16144 1822 aa23.56■■□□□ 1.36
AP3S1-204ENST00000506430 UTRNP46939 3433 aa23.56■■□□□ 1.36
AP3S1-204ENST00000506430 IL13P35225 146 aa23.55■■□□□ 1.36
AP3S1-204ENST00000506430 TMOD3Q9NYL9 352 aa23.55■■□□□ 1.36
AP3S1-204ENST00000506430 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
AP3S1-204ENST00000506430 MSH5O43196 834 aa23.54■■□□□ 1.36
AP3S1-204ENST00000506430 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
AP3S1-204ENST00000506430 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
AP3S1-204ENST00000506430 QSER1Q2KHR3 1735 aa23.53■■□□□ 1.36
AP3S1-204ENST00000506430 PLEKHO1Q53GL0 409 aaPredicted RBP23.53■■□□□ 1.36
AP3S1-204ENST00000506430 DCAF8L1A6NGE4 600 aa23.52■■□□□ 1.36
AP3S1-204ENST00000506430 MTHFSP49914 203 aa23.52■■□□□ 1.36
AP3S1-204ENST00000506430 SULT6B1Q6IMI4 303 aa23.52■■□□□ 1.36
AP3S1-204ENST00000506430 ATG3Q9NT62 314 aa23.51■■□□□ 1.35
AP3S1-204ENST00000506430 PLEKHG2Q9H7P9 1386 aa23.51■■□□□ 1.35
AP3S1-204ENST00000506430 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
AP3S1-204ENST00000506430 POLD1P28340 1107 aa23.5■■□□□ 1.35
AP3S1-204ENST00000506430 SIK1P57059 783 aa23.5■■□□□ 1.35
AP3S1-204ENST00000506430 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
AP3S1-204ENST00000506430 ZNF530Q6P9A1 599 aaPredicted RBP23.5■■□□□ 1.35
AP3S1-204ENST00000506430 AMIGO3Q86WK7 504 aa23.5■■□□□ 1.35
AP3S1-204ENST00000506430 C5P01031 1676 aa23.5■■□□□ 1.35
AP3S1-204ENST00000506430 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
AP3S1-204ENST00000506430 SMIM5Q71RC9 77 aa23.49■■□□□ 1.35
AP3S1-204ENST00000506430 DCAF5Q96JK2 942 aa23.48■■□□□ 1.35
AP3S1-204ENST00000506430 ERVV-2B6SEH9 535 aa23.47■■□□□ 1.35
AP3S1-204ENST00000506430 HSP90AB1P08238 724 aaKnown RBP23.47■■□□□ 1.35
AP3S1-204ENST00000506430 KLHL34Q8N239 644 aa23.47■■□□□ 1.35
AP3S1-204ENST00000506430 LINC00116Q8NCU8 138 aa23.47■■□□□ 1.35
AP3S1-204ENST00000506430 KDRP35968 1356 aa23.47■■□□□ 1.35
AP3S1-204ENST00000506430 HMGB2P26583 209 aaKnown RBP23.46■■□□□ 1.35
AP3S1-204ENST00000506430 ITPK1Q13572 414 aa23.46■■□□□ 1.35
AP3S1-204ENST00000506430 MSL1Q68DK7 614 aa23.46■■□□□ 1.35
AP3S1-204ENST00000506430 TAF1LQ8IZX4 1826 aa23.46■■□□□ 1.35
AP3S1-204ENST00000506430 AK7Q96M32 723 aa23.46■■□□□ 1.35
AP3S1-204ENST00000506430 KDM6AO15550 1401 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms