RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 RXRBP28702 533 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 FAM98CQ17RN3 349 aaKnown RBP14.85□□□□□ -0.03
TRIM23-205ENST00000506400 AMOTQ4VCS5 1084 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 RUNDC1Q96C34 613 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■■□□□ 12.1
TRIM23-205ENST00000506400 GLI3P10071 1580 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
TRIM23-205ENST00000506400 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
TRIM23-205ENST00000506400 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
TRIM23-205ENST00000506400 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
TRIM23-205ENST00000506400 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.03
TRIM23-205ENST00000506400 MEGF6O75095 1541 aa14.83□□□□□ -0.04
TRIM23-205ENST00000506400 EXOC5O00471 708 aa14.83□□□□□ -0.04
TRIM23-205ENST00000506400 POTEAQ6S8J7 498 aa14.83□□□□□ -0.04
TRIM23-205ENST00000506400 DDB1Q16531 1140 aa14.82□□□□□ -0.04
TRIM23-205ENST00000506400 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
TRIM23-205ENST00000506400 PARP4Q9UKK3 1724 aaKnown RBP14.81□□□□□ -0.04
TRIM23-205ENST00000506400 A0A0G2JS52 829 aa14.81□□□□□ -0.04
TRIM23-205ENST00000506400 MYT1Q01538 1121 aa14.81□□□□□ -0.04
TRIM23-205ENST00000506400 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
TRIM23-205ENST00000506400 GAS2L2Q8NHY3 880 aa14.81□□□□□ -0.04
TRIM23-205ENST00000506400 SEPT12Q8IYM1 358 aa14.8□□□□□ -0.04
TRIM23-205ENST00000506400 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
TRIM23-205ENST00000506400 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
TRIM23-205ENST00000506400 TNS2Q63HR2 1409 aa14.79□□□□□ -0.04
TRIM23-205ENST00000506400 WNK3Q9BYP7 1800 aa14.79□□□□□ -0.04
TRIM23-205ENST00000506400 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
TRIM23-205ENST00000506400 PCDH11YQ9BZA8 1340 aa14.79□□□□□ -0.04
TRIM23-205ENST00000506400 THSD7AQ9UPZ6 1657 aa14.79□□□□□ -0.04
TRIM23-205ENST00000506400 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
TRIM23-205ENST00000506400 NFE2L2Q16236 605 aa14.78□□□□□ -0.04
TRIM23-205ENST00000506400 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
TRIM23-205ENST00000506400 ZNF530Q6P9A1 599 aaPredicted RBP14.78□□□□□ -0.04
TRIM23-205ENST00000506400 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
TRIM23-205ENST00000506400 AKAP4Q5JQC9 854 aa14.77□□□□□ -0.05
TRIM23-205ENST00000506400 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.05
TRIM23-205ENST00000506400 PKD1L3Q7Z443 1732 aa14.76□□□□□ -0.05
TRIM23-205ENST00000506400 APAF1O14727 1248 aa14.76□□□□□ -0.05
TRIM23-205ENST00000506400 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
TRIM23-205ENST00000506400 PHKG2P15735 406 aa14.76□□□□□ -0.05
TRIM23-205ENST00000506400 TMPOP42166 694 aaKnown RBP14.76□□□□□ -0.05
TRIM23-205ENST00000506400 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
TRIM23-205ENST00000506400 NGEFQ8N5V2 710 aa14.76□□□□□ -0.05
TRIM23-205ENST00000506400 LRRC37A3O60309 1634 aa14.76□□□□□ -0.05
TRIM23-205ENST00000506400 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
TRIM23-205ENST00000506400 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
TRIM23-205ENST00000506400 LMOD3Q0VAK6 560 aa14.75□□□□□ -0.05
TRIM23-205ENST00000506400 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
TRIM23-205ENST00000506400 CYP27B1O15528 508 aa14.74□□□□□ -0.05
TRIM23-205ENST00000506400 RIPK4P57078 832 aa14.74□□□□□ -0.05
TRIM23-205ENST00000506400 NKX1-1Q15270 411 aaPredicted RBP14.74□□□□□ -0.05
TRIM23-205ENST00000506400 RGS12O14924 1447 aa14.74□□□□□ -0.05
TRIM23-205ENST00000506400 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
TRIM23-205ENST00000506400 KRT27Q7Z3Y8 459 aa14.73□□□□□ -0.05
TRIM23-205ENST00000506400 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
TRIM23-205ENST00000506400 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
TRIM23-205ENST00000506400 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
TRIM23-205ENST00000506400 DCAF5Q96JK2 942 aa14.72□□□□□ -0.05
TRIM23-205ENST00000506400 RRP7AQ9Y3A4 280 aaKnown RBP14.72□□□□□ -0.05
TRIM23-205ENST00000506400 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
TRIM23-205ENST00000506400 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
TRIM23-205ENST00000506400 MPRIPQ6WCQ1 1025 aa14.7□□□□□ -0.06
TRIM23-205ENST00000506400 BCL9O00512 1426 aa14.69□□□□□ -0.06
TRIM23-205ENST00000506400 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
TRIM23-205ENST00000506400 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM23-205ENST00000506400 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
TRIM23-205ENST00000506400 ERVV-2B6SEH9 535 aa14.68□□□□□ -0.06
TRIM23-205ENST00000506400 CALD1Q05682 793 aaKnown RBP14.68□□□□□ -0.06
TRIM23-205ENST00000506400 FAM196AQ6ZSG2 479 aa14.68□□□□□ -0.06
TRIM23-205ENST00000506400 IL17REQ8NFR9 667 aa14.68□□□□□ -0.06
TRIM23-205ENST00000506400 TEFQ10587 303 aa14.67□□□□□ -0.06
TRIM23-205ENST00000506400 MCM10Q7L590 875 aa14.67□□□□□ -0.06
TRIM23-205ENST00000506400 LGR6Q9HBX8 967 aa14.67□□□□□ -0.06
TRIM23-205ENST00000506400 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
TRIM23-205ENST00000506400 CEMIPQ8WUJ3 1361 aa14.67□□□□□ -0.06
TRIM23-205ENST00000506400 KDM6AO15550 1401 aaPredicted RBP14.66□□□□□ -0.06
TRIM23-205ENST00000506400 CABP4P57796 275 aa14.66□□□□□ -0.06
TRIM23-205ENST00000506400 DCTN1Q14203 1278 aa14.66□□□□□ -0.06
TRIM23-205ENST00000506400 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
TRIM23-205ENST00000506400 ADAMTS7Q9UKP4 1686 aa14.65□□□□□ -0.06
TRIM23-205ENST00000506400 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
TRIM23-205ENST00000506400 WDR63Q8IWG1 891 aa14.65□□□□□ -0.06
TRIM23-205ENST00000506400 FAM182BQ5T319 152 aa14.64□□□□□ -0.07
TRIM23-205ENST00000506400 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
TRIM23-205ENST00000506400 TMOD3Q9NYL9 352 aa14.64□□□□□ -0.07
TRIM23-205ENST00000506400 BRWD3Q6RI45 1802 aa14.64□□□□□ -0.07
TRIM23-205ENST00000506400 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
TRIM23-205ENST00000506400 TAF7Q15545 349 aaPredicted RBP14.63□□□□□ -0.07
TRIM23-205ENST00000506400 NFATC2IPQ8NCF5 419 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 ACSBG1Q96GR2 724 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 THUMPD2Q9BTF0 503 aaKnown RBP14.63□□□□□ -0.07
TRIM23-205ENST00000506400 BABAM1Q9NWV8 329 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 IL16Q14005 1332 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 ZNF521Q96K83 1311 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 MRC1P22897 1456 aa14.63□□□□□ -0.07
TRIM23-205ENST00000506400 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
TRIM23-205ENST00000506400 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
TRIM23-205ENST00000506400 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
TRIM23-205ENST00000506400 SCN11AQ9UI33 1791 aa14.61□□□□□ -0.07
TRIM23-205ENST00000506400 GNAI1P63096 354 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms