RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PLSCR1O15162 318 aa23.23■■□□□ 1.31
PDLIM7-215ENST00000506161 INSRP06213 1382 aa23.22■■□□□ 1.31
PDLIM7-215ENST00000506161 FLT4P35916 1363 aa23.21■■□□□ 1.31
PDLIM7-215ENST00000506161 PAPPAQ13219 1627 aa23.21■■□□□ 1.31
PDLIM7-215ENST00000506161 ZNF784Q8NCA9 323 aaPredicted RBP23.2■■□□□ 1.3
PDLIM7-215ENST00000506161 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
PDLIM7-215ENST00000506161 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
PDLIM7-215ENST00000506161 PANK3Q9H999 370 aa23.19■■□□□ 1.3
PDLIM7-215ENST00000506161 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
PDLIM7-215ENST00000506161 PDGFDQ9GZP0 370 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-215ENST00000506161 CGNL1Q0VF96 1302 aa23.16■■□□□ 1.3
PDLIM7-215ENST00000506161 TXNRD1Q16881 649 aa23.16■■□□□ 1.3
PDLIM7-215ENST00000506161 LY75O60449 1722 aa23.16■■□□□ 1.3
PDLIM7-215ENST00000506161 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
PDLIM7-215ENST00000506161 NSD2O96028 1365 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 SENP3-EIF4A1A0A087X0R7 540 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 ITGB4P16144 1822 aa23.15■■□□□ 1.3
PDLIM7-215ENST00000506161 TNNT2P45379 298 aaPredicted RBP23.13■■□□□ 1.29
PDLIM7-215ENST00000506161 SMG6Q86US8 1419 aaKnown RBP23.13■■□□□ 1.29
PDLIM7-215ENST00000506161 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
PDLIM7-215ENST00000506161 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
PDLIM7-215ENST00000506161 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
PDLIM7-215ENST00000506161 WASHC2AQ641Q2 1341 aa23.1■■□□□ 1.29
PDLIM7-215ENST00000506161 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
PDLIM7-215ENST00000506161 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
PDLIM7-215ENST00000506161 PTGER2P43116 358 aa23.08■■□□□ 1.29
PDLIM7-215ENST00000506161 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
PDLIM7-215ENST00000506161 EYA1Q99502 592 aa23.08■■□□□ 1.29
PDLIM7-215ENST00000506161 KCNQ4P56696 695 aa23.07■■□□□ 1.28
PDLIM7-215ENST00000506161 C1QTNF8P60827 252 aa23.07■■□□□ 1.28
PDLIM7-215ENST00000506161 CYP27B1O15528 508 aa23.06■■□□□ 1.28
PDLIM7-215ENST00000506161 TATP17735 454 aaPredicted RBP23.05■■□□□ 1.28
PDLIM7-215ENST00000506161 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
PDLIM7-215ENST00000506161 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
PDLIM7-215ENST00000506161 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
PDLIM7-215ENST00000506161 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
PDLIM7-215ENST00000506161 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-215ENST00000506161 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-215ENST00000506161 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-215ENST00000506161 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
PDLIM7-215ENST00000506161 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
PDLIM7-215ENST00000506161 IFFO2Q5TF58 517 aa23.03■■□□□ 1.28
PDLIM7-215ENST00000506161 SYT17Q9BSW7 474 aa23.03■■□□□ 1.28
PDLIM7-215ENST00000506161 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
PDLIM7-215ENST00000506161 STK32BQ9NY57 414 aa23.01■■□□□ 1.27
PDLIM7-215ENST00000506161 C5P01031 1676 aa23■■□□□ 1.27
PDLIM7-215ENST00000506161 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
PDLIM7-215ENST00000506161 PCDH11XQ9BZA7 1347 aa22.99■■□□□ 1.27
PDLIM7-215ENST00000506161 PCDH11YQ9BZA8 1340 aa22.99■■□□□ 1.27
PDLIM7-215ENST00000506161 UTRNP46939 3433 aa22.99■■□□□ 1.27
PDLIM7-215ENST00000506161 COL24A1Q17RW2 1714 aa22.97■■□□□ 1.27
PDLIM7-215ENST00000506161 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
PDLIM7-215ENST00000506161 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
PDLIM7-215ENST00000506161 MTFR1LQ9H019 292 aa22.97■■□□□ 1.27
PDLIM7-215ENST00000506161 IGSF1Q8N6C5 1336 aa22.97■■□□□ 1.27
PDLIM7-215ENST00000506161 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
PDLIM7-215ENST00000506161 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
PDLIM7-215ENST00000506161 CHD4Q14839 1912 aa22.93■■□□□ 1.26
PDLIM7-215ENST00000506161 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
PDLIM7-215ENST00000506161 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
PDLIM7-215ENST00000506161 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
PDLIM7-215ENST00000506161 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
PDLIM7-215ENST00000506161 SLC27A3Q5K4L6 730 aa22.91■■□□□ 1.26
PDLIM7-215ENST00000506161 PHKG2P15735 406 aa22.9■■□□□ 1.26
PDLIM7-215ENST00000506161 MPRIPQ6WCQ1 1025 aa22.9■■□□□ 1.26
PDLIM7-215ENST00000506161 ARXQ96QS3 562 aa22.9■■□□□ 1.26
PDLIM7-215ENST00000506161 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
PDLIM7-215ENST00000506161 CC2D1BQ5T0F9 858 aaKnown RBP22.89■■□□□ 1.25
PDLIM7-215ENST00000506161 PIGBQ92521 554 aa22.89■■□□□ 1.25
PDLIM7-215ENST00000506161 PALLDQ8WX93 1383 aa22.89■■□□□ 1.25
PDLIM7-215ENST00000506161 MAP3K5Q99683 1374 aa22.89■■□□□ 1.25
PDLIM7-215ENST00000506161 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
PDLIM7-215ENST00000506161 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-215ENST00000506161 SPG7Q9UQ90 795 aa22.88■■□□□ 1.25
PDLIM7-215ENST00000506161 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
PDLIM7-215ENST00000506161 IL13P35225 146 aa22.87■■□□□ 1.25
PDLIM7-215ENST00000506161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.87■■□□□ 1.25
PDLIM7-215ENST00000506161 KDM6AO15550 1401 aaPredicted RBP22.86■■□□□ 1.25
PDLIM7-215ENST00000506161 GPR162Q16538 588 aa22.86■■□□□ 1.25
PDLIM7-215ENST00000506161 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-215ENST00000506161 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-215ENST00000506161 AMIGO3Q86WK7 504 aa22.85■■□□□ 1.25
PDLIM7-215ENST00000506161 SCN11AQ9UI33 1791 aa22.85■■□□□ 1.25
PDLIM7-215ENST00000506161 MTHFSP49914 203 aa22.84■■□□□ 1.25
PDLIM7-215ENST00000506161 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
PDLIM7-215ENST00000506161 IFNL2Q8IZJ0 200 aa22.83■■□□□ 1.25
PDLIM7-215ENST00000506161 KDRP35968 1356 aa22.83■■□□□ 1.25
PDLIM7-215ENST00000506161 SULT6B1Q6IMI4 303 aa22.81■■□□□ 1.24
PDLIM7-215ENST00000506161 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
PDLIM7-215ENST00000506161 COL5A3P25940 1745 aaPredicted RBP22.8■■□□□ 1.24
PDLIM7-215ENST00000506161 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
PDLIM7-215ENST00000506161 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
PDLIM7-215ENST00000506161 NPC1L1Q9UHC9 1359 aa22.79■■□□□ 1.24
PDLIM7-215ENST00000506161 TFCP2L1Q9NZI6 479 aa22.79■■□□□ 1.24
PDLIM7-215ENST00000506161 ZNF530Q6P9A1 599 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-215ENST00000506161 ITPK1Q13572 414 aa22.77■■□□□ 1.24
PDLIM7-215ENST00000506161 SLC4A9Q96Q91 983 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms