RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 KIF24Q5T7B8 1368 aa28.43■■■□□ 2.14
TRIO-207ENST00000505971 SLC27A3Q5K4L6 730 aa28.42■■■□□ 2.14
TRIO-207ENST00000505971 CGNL1Q0VF96 1302 aa28.42■■■□□ 2.14
TRIO-207ENST00000505971 NSD2O96028 1365 aa28.41■■■□□ 2.14
TRIO-207ENST00000505971 INSRP06213 1382 aa28.41■■■□□ 2.14
TRIO-207ENST00000505971 ZNF827Q17R98 1081 aa28.41■■■□□ 2.14
TRIO-207ENST00000505971 AKT1S1Q96B36 256 aa28.41■■■□□ 2.14
TRIO-207ENST00000505971 PRIM1P49642 420 aaKnown RBP28.4■■■□□ 2.14
TRIO-207ENST00000505971 HSP90AB2PQ58FF8 381 aa28.4■■■□□ 2.14
TRIO-207ENST00000505971 DOT1LQ8TEK3 1739 aa28.4■■■□□ 2.14
TRIO-207ENST00000505971 LY75O60449 1722 aa28.38■■■□□ 2.13
TRIO-207ENST00000505971 QSER1Q2KHR3 1735 aa28.38■■■□□ 2.13
TRIO-207ENST00000505971 FLT4P35916 1363 aa28.37■■■□□ 2.13
TRIO-207ENST00000505971 SMG6Q86US8 1419 aaKnown RBP28.36■■■□□ 2.13
TRIO-207ENST00000505971 UTRNP46939 3433 aa28.36■■■□□ 2.13
TRIO-207ENST00000505971 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
TRIO-207ENST00000505971 SYT17Q9BSW7 474 aa28.35■■■□□ 2.13
TRIO-207ENST00000505971 NSD3Q9BZ95 1437 aa28.35■■■□□ 2.13
TRIO-207ENST00000505971 DCAF8L1A6NGE4 600 aa28.34■■■□□ 2.13
TRIO-207ENST00000505971 SYTL4Q96C24 671 aaPredicted RBP28.34■■■□□ 2.13
TRIO-207ENST00000505971 YY1P25490 414 aa28.33■■■□□ 2.13
TRIO-207ENST00000505971 RAPGEF4Q8WZA2 1011 aa28.33■■■□□ 2.13
TRIO-207ENST00000505971 FHDC1Q9C0D6 1143 aaPredicted RBP28.33■■■□□ 2.13
TRIO-207ENST00000505971 COL24A1Q17RW2 1714 aa28.32■■■□□ 2.12
TRIO-207ENST00000505971 SLC16A10Q8TF71 515 aa28.32■■■□□ 2.12
TRIO-207ENST00000505971 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
TRIO-207ENST00000505971 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
TRIO-207ENST00000505971 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 ANKRD26Q9UPS8 1709 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 PNPLA7Q6ZV29 1317 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 KCNQ4P56696 695 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 ARXQ96QS3 562 aa28.29■■■□□ 2.12
TRIO-207ENST00000505971 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
TRIO-207ENST00000505971 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
TRIO-207ENST00000505971 PCDH11XQ9BZA7 1347 aa28.26■■■□□ 2.11
TRIO-207ENST00000505971 PCDH11YQ9BZA8 1340 aa28.26■■■□□ 2.11
TRIO-207ENST00000505971 WASHC2AQ641Q2 1341 aa28.25■■■□□ 2.11
TRIO-207ENST00000505971 CYP27B1O15528 508 aa28.25■■■□□ 2.11
TRIO-207ENST00000505971 CCNL1Q9UK58 526 aaPredicted RBP28.24■■■□□ 2.11
TRIO-207ENST00000505971 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
TRIO-207ENST00000505971 TFCP2L1Q9NZI6 479 aa28.23■■■□□ 2.11
TRIO-207ENST00000505971 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
TRIO-207ENST00000505971 ITGB4P16144 1822 aa28.2■■■□□ 2.1
TRIO-207ENST00000505971 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
TRIO-207ENST00000505971 TOGARAM1Q9Y4F4 1720 aa28.18■■■□□ 2.1
TRIO-207ENST00000505971 EYA1Q99502 592 aa28.18■■■□□ 2.1
TRIO-207ENST00000505971 TAF1LQ8IZX4 1826 aa28.16■■■□□ 2.1
TRIO-207ENST00000505971 PPM1GO15355 546 aaPredicted RBP28.16■■■□□ 2.1
TRIO-207ENST00000505971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.16■■■□□ 2.16e-7■□□□□ 10.3
TRIO-207ENST00000505971 CHD4Q14839 1912 aa28.16■■■□□ 2.1
TRIO-207ENST00000505971 POLD1P28340 1107 aa28.15■■■□□ 2.1
TRIO-207ENST00000505971 EIF4G2P78344 907 aaKnown RBP eCLIP28.15■■■□□ 2.1
TRIO-207ENST00000505971 MPRIPQ6WCQ1 1025 aa28.15■■■□□ 2.1
TRIO-207ENST00000505971 COL23A1Q86Y22 540 aaPredicted RBP28.15■■■□□ 2.1
TRIO-207ENST00000505971 C5P01031 1676 aa28.15■■■□□ 2.1
TRIO-207ENST00000505971 PALLDQ8WX93 1383 aa28.13■■■□□ 2.09
TRIO-207ENST00000505971 HSPA5P11021 654 aaKnown RBP28.13■■■□□ 2.09
TRIO-207ENST00000505971 HMGB2P26583 209 aaKnown RBP28.13■■■□□ 2.09
TRIO-207ENST00000505971 SPG7Q9UQ90 795 aa28.12■■■□□ 2.09
TRIO-207ENST00000505971 GOLGB1Q14789 3259 aaKnown RBP28.12■■■□□ 2.09
TRIO-207ENST00000505971 PIGBQ92521 554 aa28.1■■■□□ 2.09
TRIO-207ENST00000505971 SMARCC1Q92922 1105 aaPredicted RBP28.1■■■□□ 2.09
TRIO-207ENST00000505971 PANK3Q9H999 370 aa28.09■■■□□ 2.09
TRIO-207ENST00000505971 PLEKHG2Q9H7P9 1386 aa28.09■■■□□ 2.09
TRIO-207ENST00000505971 EIF4A2Q14240 407 aaKnown RBP28.08■■■□□ 2.09
TRIO-207ENST00000505971 POLR3GLQ9BT43 218 aa28.08■■■□□ 2.09
TRIO-207ENST00000505971 FLAD1Q8NFF5 587 aa28.06■■■□□ 2.08
TRIO-207ENST00000505971 C4BP0C0L5 1744 aa28.05■■■□□ 2.08
TRIO-207ENST00000505971 PHKG2P15735 406 aa28.05■■■□□ 2.08
TRIO-207ENST00000505971 TNNT2P45379 298 aaPredicted RBP28.04■■■□□ 2.08
TRIO-207ENST00000505971 IFNL2Q8IZJ0 200 aa28.04■■■□□ 2.08
TRIO-207ENST00000505971 ZNF784Q8NCA9 323 aaPredicted RBP28.04■■■□□ 2.08
TRIO-207ENST00000505971 IGSF1Q8N6C5 1336 aa28.03■■■□□ 2.08
TRIO-207ENST00000505971 UBR3Q6ZT12 1888 aa28.02■■■□□ 2.08
TRIO-207ENST00000505971 MSH5O43196 834 aa28.02■■■□□ 2.08
TRIO-207ENST00000505971 NLGN2Q8NFZ4 835 aa28.02■■■□□ 2.08
TRIO-207ENST00000505971 GPR162Q16538 588 aa28.01■■■□□ 2.07
TRIO-207ENST00000505971 AMIGO3Q86WK7 504 aa28.01■■■□□ 2.07
TRIO-207ENST00000505971 KLHL34Q8N239 644 aa28■■■□□ 2.07
TRIO-207ENST00000505971 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
TRIO-207ENST00000505971 LOC102724428A0A0B4J2F2 783 aa27.99■■■□□ 2.07
TRIO-207ENST00000505971 SIK1P57059 783 aa27.99■■■□□ 2.07
TRIO-207ENST00000505971 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
TRIO-207ENST00000505971 ASAP1Q9ULH1 1129 aa27.98■■■□□ 2.07
TRIO-207ENST00000505971 MSL1Q68DK7 614 aa27.97■■■□□ 2.07
TRIO-207ENST00000505971 AK7Q96M32 723 aa27.96■■■□□ 2.07
TRIO-207ENST00000505971 LINC00116Q8NCU8 138 aa27.95■■■□□ 2.06
TRIO-207ENST00000505971 ATG3Q9NT62 314 aa27.95■■■□□ 2.06
TRIO-207ENST00000505971 ITPK1Q13572 414 aa27.94■■■□□ 2.06
TRIO-207ENST00000505971 CD2APQ9Y5K6 639 aa27.94■■■□□ 2.06
TRIO-207ENST00000505971 SSFA2P28290 1259 aa27.93■■■□□ 2.06
TRIO-207ENST00000505971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.92■■■□□ 2.06
TRIO-207ENST00000505971 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
TRIO-207ENST00000505971 MORC1Q86VD1 984 aa27.92■■■□□ 2.06
TRIO-207ENST00000505971 SMIM5Q71RC9 77 aa27.91■■■□□ 2.06
TRIO-207ENST00000505971 ZNF831Q5JPB2 1677 aa27.91■■■□□ 2.06
TRIO-207ENST00000505971 YBX3P16989 372 aaKnown RBP eCLIP27.9■■■□□ 2.06
TRIO-207ENST00000505971 ATP6V1AP38606 617 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms