RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 PEAK1Q9H792 1746 aa10.67□□□□□ -0.7
VCAN-206ENST00000505615 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
VCAN-206ENST00000505615 NBPF14Q5TI25 921 aa10.67□□□□□ -0.7
VCAN-206ENST00000505615 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
VCAN-206ENST00000505615 SPATA31E1Q6ZUB1 1445 aa10.67□□□□□ -0.7
VCAN-206ENST00000505615 ITGAEP38570 1179 aa10.66□□□□□ -0.7
VCAN-206ENST00000505615 PTGER2P43116 358 aa10.66□□□□□ -0.7
VCAN-206ENST00000505615 SIRT1Q96EB6 747 aa10.66□□□□□ -0.7
VCAN-206ENST00000505615 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
VCAN-206ENST00000505615 PARP4Q9UKK3 1724 aaKnown RBP10.66□□□□□ -0.7
VCAN-206ENST00000505615 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.7
VCAN-206ENST00000505615 PMFBP1Q8TBY8 1022 aa10.65□□□□□ -0.7
VCAN-206ENST00000505615 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
VCAN-206ENST00000505615 ANO8Q9HCE9 1232 aaPredicted RBP10.65□□□□□ -0.7
VCAN-206ENST00000505615 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
VCAN-206ENST00000505615 KIAA0232Q92628 1395 aa10.64□□□□□ -0.71
VCAN-206ENST00000505615 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
VCAN-206ENST00000505615 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
VCAN-206ENST00000505615 ACIN1Q9UKV3 1341 aaKnown RBP10.63□□□□□ -0.71
VCAN-206ENST00000505615 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
VCAN-206ENST00000505615 PRDM11Q9NQV5 511 aa10.63□□□□□ -0.71
VCAN-206ENST00000505615 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
VCAN-206ENST00000505615 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
VCAN-206ENST00000505615 DLC1Q96QB1 1528 aa10.62□□□□□ -0.71
VCAN-206ENST00000505615 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
VCAN-206ENST00000505615 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
VCAN-206ENST00000505615 C2orf72A6NCS6 295 aa10.61□□□□□ -0.71
VCAN-206ENST00000505615 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
VCAN-206ENST00000505615 TULP4Q9NRJ4 1543 aa10.61□□□□□ -0.71
VCAN-206ENST00000505615 LRRC37A3O60309 1634 aa10.6□□□□□ -0.71
VCAN-206ENST00000505615 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
VCAN-206ENST00000505615 GPRASP1Q5JY77 1395 aa10.6□□□□□ -0.71
VCAN-206ENST00000505615 WNK3Q9BYP7 1800 aa10.6□□□□□ -0.71
VCAN-206ENST00000505615 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 SHANK3Q9BYB0 1731 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 STK25O00506 426 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
VCAN-206ENST00000505615 PRAM1Q96QH2 718 aa10.59□□□□□ -0.71
VCAN-206ENST00000505615 DHX57Q6P158 1386 aaKnown RBP10.58□□□□□ -0.72
VCAN-206ENST00000505615 SLC34A2O95436 690 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
VCAN-206ENST00000505615 RGL3Q3MIN7 710 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 FHDC1Q9C0D6 1143 aaPredicted RBP10.58□□□□□ -0.72
VCAN-206ENST00000505615 C14orf93Q9H972 538 aaKnown RBP10.58□□□□□ -0.72
VCAN-206ENST00000505615 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 OVOS2A0A0J9YW53 1432 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 OVOS2Q6IE36 1432 aa10.58□□□□□ -0.72
VCAN-206ENST00000505615 ADGRB1O14514 1584 aa10.57□□□□□ -0.72
VCAN-206ENST00000505615 ATP7BP35670 1465 aa10.57□□□□□ -0.72
VCAN-206ENST00000505615 PLSCR1O15162 318 aa10.57□□□□□ -0.72
VCAN-206ENST00000505615 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
VCAN-206ENST00000505615 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
VCAN-206ENST00000505615 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
VCAN-206ENST00000505615 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
VCAN-206ENST00000505615 PTF1AQ7RTS3 328 aa10.56□□□□□ -0.72
VCAN-206ENST00000505615 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
VCAN-206ENST00000505615 EIF3AQ14152 1382 aaKnown RBP10.55□□□□□ -0.72
VCAN-206ENST00000505615 MAP3K5Q99683 1374 aa10.55□□□□□ -0.72
VCAN-206ENST00000505615 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
VCAN-206ENST00000505615 NUDT7P0C024 238 aa10.55□□□□□ -0.72
VCAN-206ENST00000505615 PBX2P40425 430 aa10.55□□□□□ -0.72
VCAN-206ENST00000505615 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
VCAN-206ENST00000505615 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
VCAN-206ENST00000505615 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
VCAN-206ENST00000505615 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
VCAN-206ENST00000505615 PAPPAQ13219 1627 aa10.54□□□□□ -0.72
VCAN-206ENST00000505615 COL5A2P05997 1499 aaPredicted RBP10.54□□□□□ -0.72
VCAN-206ENST00000505615 CPDO75976 1380 aa10.53□□□□□ -0.72
VCAN-206ENST00000505615 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
VCAN-206ENST00000505615 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
VCAN-206ENST00000505615 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
VCAN-206ENST00000505615 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
VCAN-206ENST00000505615 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
VCAN-206ENST00000505615 BCL9O00512 1426 aa10.52□□□□□ -0.73
VCAN-206ENST00000505615 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
VCAN-206ENST00000505615 POGKQ9P215 609 aa10.52□□□□□ -0.73
VCAN-206ENST00000505615 USP19O94966 1318 aa10.52□□□□□ -0.73
VCAN-206ENST00000505615 MINK1Q8N4C8 1332 aaPredicted RBP10.52□□□□□ -0.73
VCAN-206ENST00000505615 ARHGEF28Q8N1W1 1705 aaKnown RBP10.51□□□□□ -0.73
VCAN-206ENST00000505615 RGL2O15211 777 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 EVA1CP58658 441 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 NUTM2GQ5VZR2 741 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 MTFR1LQ9H019 292 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 AATKQ6ZMQ8 1374 aa10.51□□□□□ -0.73
VCAN-206ENST00000505615 COL18A1P39060 1754 aa10.5□□□□□ -0.73
VCAN-206ENST00000505615 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
VCAN-206ENST00000505615 SLC15A2Q16348 729 aa10.5□□□□□ -0.73
VCAN-206ENST00000505615 POLR3AO14802 1390 aaPredicted RBP10.5□□□□□ -0.73
VCAN-206ENST00000505615 CRB1P82279 1406 aa10.5□□□□□ -0.73
VCAN-206ENST00000505615 ARXQ96QS3 562 aa10.49□□□□□ -0.73
VCAN-206ENST00000505615 STK32BQ9NY57 414 aa10.49□□□□□ -0.73
VCAN-206ENST00000505615 QSER1Q2KHR3 1735 aa10.49□□□□□ -0.73
VCAN-206ENST00000505615 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
VCAN-206ENST00000505615 NHSQ6T4R5 1651 aa10.48□□□□□ -0.73
VCAN-206ENST00000505615 TXNRD1Q16881 649 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms