RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 TTC12Q9H892 705 aaPredicted RBP9.64□□□□□ -0.87
PROM1-206ENST00000505450 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 SMC3Q9UQE7 1217 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
PROM1-206ENST00000505450 VAMP4O75379 141 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 PHACTR3Q96KR7 559 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 ZNF692Q9BU19 519 aaPredicted RBP9.64□□□□□ -0.87
PROM1-206ENST00000505450 CDK19Q9BWU1 502 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 F6X3S4 739 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 DTNBO60941 627 aa9.64□□□□□ -0.87
PROM1-206ENST00000505450 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
PROM1-206ENST00000505450 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 TMX3Q96JJ7 454 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 KRT24Q2M2I5 525 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 C17orf53Q8N3J3 647 aaPredicted RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 TMEM63CQ9P1W3 806 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 TRAPPC8Q9Y2L5 1435 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 PRDM15P57071 1507 aaPredicted RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 DYNC1I1O14576 645 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 IGSF3O75054 1194 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 IFT57Q9NWB7 429 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 HCLS1P14317 486 aaPredicted RBP9.63□□□□□ -0.87
PROM1-206ENST00000505450 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
PROM1-206ENST00000505450 PLCH2O75038 1416 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 TRPM1Q7Z4N2 1603 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
PROM1-206ENST00000505450 YEATS2Q9ULM3 1422 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 ZNF445P59923 1031 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 ZRSR1Q15695 479 aaKnown RBP9.62□□□□□ -0.87
PROM1-206ENST00000505450 MCM10Q7L590 875 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 RPAP2Q8IXW5 612 aaPredicted RBP9.62□□□□□ -0.87
PROM1-206ENST00000505450 KIF3AQ9Y496 699 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 PBRM1Q86U86 1689 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 MEIS3Q99687 375 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 TSPYL4Q9UJ04 414 aa9.62□□□□□ -0.87
PROM1-206ENST00000505450 GSPT1P15170 499 aaKnown RBP9.61□□□□□ -0.87
PROM1-206ENST00000505450 ATP6V1DQ9Y5K8 247 aa9.61□□□□□ -0.87
PROM1-206ENST00000505450 IL16Q14005 1332 aa9.61□□□□□ -0.87
PROM1-206ENST00000505450 ADCY5O95622 1261 aa9.61□□□□□ -0.87
PROM1-206ENST00000505450 MCM2P49736 904 aa9.61□□□□□ -0.87
PROM1-206ENST00000505450 DIAPH3Q9NSV4 1193 aa9.61□□□□□ -0.87
PROM1-206ENST00000505450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
PROM1-206ENST00000505450 WDR33Q9C0J8 1336 aaKnown RBP9.61□□□□□ -0.87
PROM1-206ENST00000505450 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 PTPRTO14522 1441 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 ZNF518AQ6AHZ1 1483 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 SURF6O75683 361 aaKnown RBP9.6□□□□□ -0.87
PROM1-206ENST00000505450 EIF2S2P20042 333 aaKnown RBP9.6□□□□□ -0.87
PROM1-206ENST00000505450 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
PROM1-206ENST00000505450 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 DCTPP1Q9H773 170 aa9.6□□□□□ -0.87
PROM1-206ENST00000505450 KCNA6P17658 529 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 MCM5P33992 734 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 NOLC1Q14978 699 aaKnown RBP eCLIP9.59□□□□□ -0.87
PROM1-206ENST00000505450 HS1BP3Q53T59 392 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 FERMT3Q86UX7 667 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 DUOX2Q9NRD8 1548 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 NME9Q86XW9 330 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 KIF2CQ99661 725 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 TRIM5Q9C035 493 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 LRRCC1Q9C099 1032 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
PROM1-206ENST00000505450 CFAP65Q6ZU64 1925 aaKnown RBP9.59□□□□□ -0.87
PROM1-206ENST00000505450 GNAI2P04899 355 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 USP48Q86UV5 1035 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 ERVK-7P63135 1459 aa9.59□□□□□ -0.87
PROM1-206ENST00000505450 GIMAP6Q6P9H5 292 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 FOSBP53539 338 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 CAMK4Q16566 473 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 SIRT2Q8IXJ6 389 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 DDX17Q92841 729 aaKnown RBP9.58□□□□□ -0.88
PROM1-206ENST00000505450 SLAIN2Q9P270 581 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 ANKRD36BQ8N2N9 1353 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 BICD2Q8TD16 824 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
PROM1-206ENST00000505450 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 C19orf44Q9H6X5 657 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 WWC3Q9ULE0 1092 aa9.58□□□□□ -0.88
PROM1-206ENST00000505450 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
PROM1-206ENST00000505450 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 ATP10AO60312 1499 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 CHRNA2Q15822 529 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 276.1 ms