RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
CPNE4-204ENST00000505331 MAP2K1Q02750 393 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-204ENST00000505331 ABTB2Q8N961 1025 aa6.49□□□□□ -1.37
CPNE4-204ENST00000505331 QSER1Q2KHR3 1735 aa6.49□□□□□ -1.37
CPNE4-204ENST00000505331 ZBTB22O15209 634 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 VEGFBP49765 207 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 KCNQ4P56696 695 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 TGFB2P61812 414 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 NLRP13Q86W25 1043 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 POGKQ9P215 609 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 NHSQ6T4R5 1651 aa6.48□□□□□ -1.37
CPNE4-204ENST00000505331 ZBTB7CA1YPR0 619 aa6.47□□□□□ -1.37
CPNE4-204ENST00000505331 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-204ENST00000505331 KNDC1Q76NI1 1749 aa6.47□□□□□ -1.37
CPNE4-204ENST00000505331 IFT172Q9UG01 1749 aa6.47□□□□□ -1.37
CPNE4-204ENST00000505331 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
CPNE4-204ENST00000505331 TRPM1Q7Z4N2 1603 aa6.47□□□□□ -1.37
CPNE4-204ENST00000505331 ROCK1Q13464 1354 aa6.46□□□□□ -1.37
CPNE4-204ENST00000505331 CCDC7Q96M83 1385 aa6.46□□□□□ -1.37
CPNE4-204ENST00000505331 WASLO00401 505 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-204ENST00000505331 FCHSD2O94868 740 aa6.46□□□□□ -1.38
CPNE4-204ENST00000505331 CSB-PGBD3P0DP91 1061 aa6.46□□□□□ -1.38
CPNE4-204ENST00000505331 MCOLN1Q9GZU1 580 aa6.46□□□□□ -1.38
CPNE4-204ENST00000505331 TNRC18O15417 2968 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-204ENST00000505331 RGPD8O14715 1765 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-204ENST00000505331 GLTPD2A6NH11 291 aa6.45□□□□□ -1.38
CPNE4-204ENST00000505331 PITPNM1O00562 1244 aa6.45□□□□□ -1.38
CPNE4-204ENST00000505331 FAM50AQ14320 339 aaKnown RBP6.45□□□□□ -1.38
CPNE4-204ENST00000505331 HABP4Q5JVS0 413 aaKnown RBP6.45□□□□□ -1.38
CPNE4-204ENST00000505331 AXIN2Q9Y2T1 843 aa6.45□□□□□ -1.38
CPNE4-204ENST00000505331 PIK3C2GO75747 1445 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 A0A0G2JLW4 131 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 FXR2P51116 673 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPNE4-204ENST00000505331 CHADLQ6NUI6 762 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 BEGAINQ9BUH8 593 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 C14orf93Q9H972 538 aaKnown RBP6.44□□□□□ -1.38
CPNE4-204ENST00000505331 ABCC6O95255 1503 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 PITPNM2Q9BZ72 1349 aa6.44□□□□□ -1.38
CPNE4-204ENST00000505331 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-204ENST00000505331 TNRC6CQ9HCJ0 1690 aaKnown RBP6.43□□□□□ -1.38
CPNE4-204ENST00000505331 TMEM88BA6NKF7 163 aa6.43□□□□□ -1.38
CPNE4-204ENST00000505331 SPATA31E1Q6ZUB1 1445 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 AKAP12Q02952 1782 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 ATXN8OSP0DMR3 200 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 IL2RBP14784 551 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 NBPF15Q8N660 670 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
CPNE4-204ENST00000505331 NUDT16Q96DE0 195 aaKnown RBP6.42□□□□□ -1.38
CPNE4-204ENST00000505331 DCAF5Q96JK2 942 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 ACEP12821 1306 aa6.42□□□□□ -1.38
CPNE4-204ENST00000505331 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
CPNE4-204ENST00000505331 RASSF10A6NK89 507 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 HAX1O00165 279 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 DPEP1P16444 411 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 PRIM1P49642 420 aaKnown RBP6.41□□□□□ -1.38
CPNE4-204ENST00000505331 SOX10P56693 466 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 DGKZQ13574 1117 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 DEFB115Q30KQ5 88 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 PASKQ96RG2 1323 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 WDR33Q9C0J8 1336 aaKnown RBP6.41□□□□□ -1.38
CPNE4-204ENST00000505331 ANKRD36BQ8N2N9 1353 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 KIF1BO60333 1816 aa6.41□□□□□ -1.38
CPNE4-204ENST00000505331 PPLO60437 1756 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 PLEKHG3A1L390 1219 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 POTECB2RU33 542 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 FXR1P51114 621 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPNE4-204ENST00000505331 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 SLC17A8Q8NDX2 589 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 PIM2Q9P1W9 311 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 CCDC61Q9Y6R9 512 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 BTAF1O14981 1849 aa6.4□□□□□ -1.38
CPNE4-204ENST00000505331 ERBB3P21860 1342 aa6.4□□□□□ -1.39
CPNE4-204ENST00000505331 USP47Q96K76 1375 aa6.4□□□□□ -1.39
CPNE4-204ENST00000505331 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.39
CPNE4-204ENST00000505331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.39□□□□□ -1.39
CPNE4-204ENST00000505331 CA12O43570 354 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 MMP10P09238 476 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 NLRP6P59044 892 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
CPNE4-204ENST00000505331 CFAP70Q5T0N1 1121 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 DPY19L2Q6NUT2 758 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 SMIM5Q71RC9 77 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 AK7Q96M32 723 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 CPSF1Q10570 1443 aaKnown RBP6.39□□□□□ -1.39
CPNE4-204ENST00000505331 COL18A1P39060 1754 aa6.39□□□□□ -1.39
CPNE4-204ENST00000505331 PHF14O94880 888 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 LMNB1P20700 586 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 KCNA3P22001 575 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 SSFA2P28290 1259 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 KCNH5Q8NCM2 988 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 DDX54Q8TDD1 881 aaKnown RBP6.38□□□□□ -1.39
CPNE4-204ENST00000505331 CCDC87Q9NVE4 849 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 NSD2O96028 1365 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 PIK3C2AO00443 1686 aa6.38□□□□□ -1.39
CPNE4-204ENST00000505331 TUBGCP6Q96RT7 1819 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms