RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MEGF6O75095 1541 aa27.66■■■□□ 2.02
UBE2D3-220ENST00000505307 MYOM1P52179 1685 aa27.65■■■□□ 2.02
UBE2D3-220ENST00000505307 DCAF8L1A6NGE4 600 aa27.65■■■□□ 2.02
UBE2D3-220ENST00000505307 PRIM1P49642 420 aaKnown RBP27.64■■■□□ 2.02
UBE2D3-220ENST00000505307 MTFR1LQ9H019 292 aa27.64■■■□□ 2.02
UBE2D3-220ENST00000505307 RGPD2P0DJD1 1756 aa27.63■■■□□ 2.01
UBE2D3-220ENST00000505307 TATP17735 454 aaPredicted RBP27.63■■■□□ 2.01
UBE2D3-220ENST00000505307 SYTL4Q96C24 671 aaPredicted RBP27.63■■■□□ 2.01
UBE2D3-220ENST00000505307 EIF4G2P78344 907 aaKnown RBP eCLIP27.62■■■□□ 2.01
UBE2D3-220ENST00000505307 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
UBE2D3-220ENST00000505307 PAPPAQ13219 1627 aa27.61■■■□□ 2.01
UBE2D3-220ENST00000505307 PTGER2P43116 358 aa27.61■■■□□ 2.01
UBE2D3-220ENST00000505307 USHBP1Q8N6Y0 703 aa27.61■■■□□ 2.01
UBE2D3-220ENST00000505307 ATF5Q9Y2D1 282 aaPredicted RBP27.61■■■□□ 2.01
UBE2D3-220ENST00000505307 CCER1Q8TC90 406 aaPredicted RBP27.59■■■□□ 2.01
UBE2D3-220ENST00000505307 EMILIN1Q9Y6C2 1016 aa27.58■■■□□ 2.01
UBE2D3-220ENST00000505307 PCDH11XQ9BZA7 1347 aa27.58■■■□□ 2.01
UBE2D3-220ENST00000505307 PCDH11YQ9BZA8 1340 aa27.58■■■□□ 2.01
UBE2D3-220ENST00000505307 SHANK3Q9BYB0 1731 aa27.57■■■□□ 2
UBE2D3-220ENST00000505307 ZNF827Q17R98 1081 aa27.56■■■□□ 2
UBE2D3-220ENST00000505307 AKT1S1Q96B36 256 aa27.56■■■□□ 2
UBE2D3-220ENST00000505307 HMGB2P26583 209 aaKnown RBP27.55■■■□□ 2
UBE2D3-220ENST00000505307 SLC16A10Q8TF71 515 aa27.55■■■□□ 2
UBE2D3-220ENST00000505307 POLR3GLQ9BT43 218 aa27.55■■■□□ 2
UBE2D3-220ENST00000505307 WASHC2AQ641Q2 1341 aa27.55■■■□□ 2
UBE2D3-220ENST00000505307 NSD2O96028 1365 aa27.55■■■□□ 2
UBE2D3-220ENST00000505307 DOT1LQ8TEK3 1739 aa27.55■■■□□ 2
UBE2D3-220ENST00000505307 PPM1GO15355 546 aaPredicted RBP27.54■■■□□ 2
UBE2D3-220ENST00000505307 SGIP1Q9BQI5 828 aa27.54■■■□□ 2
UBE2D3-220ENST00000505307 HSPA5P11021 654 aaKnown RBP27.53■■■□□ 2
UBE2D3-220ENST00000505307 NCAPD2Q15021 1401 aa27.5■■□□□ 1.99
UBE2D3-220ENST00000505307 TFCP2L1Q9NZI6 479 aa27.5■■□□□ 1.99
UBE2D3-220ENST00000505307 POLKQ9UBT6 870 aa27.5■■□□□ 1.99
UBE2D3-220ENST00000505307 CCNL1Q9UK58 526 aaPredicted RBP27.5■■□□□ 1.99
UBE2D3-220ENST00000505307 ANKRD26Q9UPS8 1709 aa27.5■■□□□ 1.99
UBE2D3-220ENST00000505307 LY75O60449 1722 aa27.49■■□□□ 1.99
UBE2D3-220ENST00000505307 YY1P25490 414 aa27.48■■□□□ 1.99
UBE2D3-220ENST00000505307 ARXQ96QS3 562 aa27.48■■□□□ 1.99
UBE2D3-220ENST00000505307 SYT17Q9BSW7 474 aa27.48■■□□□ 1.99
UBE2D3-220ENST00000505307 FHDC1Q9C0D6 1143 aaPredicted RBP27.48■■□□□ 1.99
UBE2D3-220ENST00000505307 SPG7Q9UQ90 795 aa27.48■■□□□ 1.99
UBE2D3-220ENST00000505307 CYP27B1O15528 508 aa27.47■■□□□ 1.99
UBE2D3-220ENST00000505307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
UBE2D3-220ENST00000505307 QSER1Q2KHR3 1735 aa27.47■■□□□ 1.99
UBE2D3-220ENST00000505307 MAP2P11137 1827 aaKnown RBP27.46■■□□□ 1.99
UBE2D3-220ENST00000505307 PNPLA7Q6ZV29 1317 aa27.45■■□□□ 1.99
UBE2D3-220ENST00000505307 KCNQ4P56696 695 aa27.45■■□□□ 1.98
UBE2D3-220ENST00000505307 EYA1Q99502 592 aa27.45■■□□□ 1.98
UBE2D3-220ENST00000505307 PANK3Q9H999 370 aa27.45■■□□□ 1.98
UBE2D3-220ENST00000505307 NKX1-1Q15270 411 aaPredicted RBP27.44■■□□□ 1.98
UBE2D3-220ENST00000505307 MAP3K5Q99683 1374 aa27.44■■□□□ 1.98
UBE2D3-220ENST00000505307 POLD1P28340 1107 aa27.43■■□□□ 1.98
UBE2D3-220ENST00000505307 PKD1L3Q7Z443 1732 aa27.42■■□□□ 1.98
UBE2D3-220ENST00000505307 MPRIPQ6WCQ1 1025 aa27.42■■□□□ 1.98
UBE2D3-220ENST00000505307 SMARCC1Q92922 1105 aaPredicted RBP27.42■■□□□ 1.98
UBE2D3-220ENST00000505307 PLEKHG2Q9H7P9 1386 aa27.42■■□□□ 1.98
UBE2D3-220ENST00000505307 TNNT2P45379 298 aaPredicted RBP27.4■■□□□ 1.98
UBE2D3-220ENST00000505307 PALLDQ8WX93 1383 aa27.39■■□□□ 1.98
UBE2D3-220ENST00000505307 EIF4A2Q14240 407 aaKnown RBP27.39■■□□□ 1.98
UBE2D3-220ENST00000505307 IFNL2Q8IZJ0 200 aa27.36■■□□□ 1.97
UBE2D3-220ENST00000505307 FLAD1Q8NFF5 587 aa27.36■■□□□ 1.97
UBE2D3-220ENST00000505307 PIGBQ92521 554 aa27.34■■□□□ 1.97
UBE2D3-220ENST00000505307 KNSTRNQ9Y448 316 aa27.34■■□□□ 1.97
UBE2D3-220ENST00000505307 COL24A1Q17RW2 1714 aa27.33■■□□□ 1.97
UBE2D3-220ENST00000505307 TUBGCP6Q96RT7 1819 aa27.33■■□□□ 1.97
UBE2D3-220ENST00000505307 MORC1Q86VD1 984 aa27.33■■□□□ 1.97
UBE2D3-220ENST00000505307 COL23A1Q86Y22 540 aaPredicted RBP27.33■■□□□ 1.97
UBE2D3-220ENST00000505307 IGSF1Q8N6C5 1336 aa27.33■■□□□ 1.97
UBE2D3-220ENST00000505307 MSH5O43196 834 aa27.32■■□□□ 1.96
UBE2D3-220ENST00000505307 PHKG2P15735 406 aa27.32■■□□□ 1.96
UBE2D3-220ENST00000505307 TOGARAM1Q9Y4F4 1720 aa27.31■■□□□ 1.96
UBE2D3-220ENST00000505307 TMOD3Q9NYL9 352 aa27.31■■□□□ 1.96
UBE2D3-220ENST00000505307 ITGB4P16144 1822 aa27.31■■□□□ 1.96
UBE2D3-220ENST00000505307 C5P01031 1676 aa27.3■■□□□ 1.96
UBE2D3-220ENST00000505307 KLHL34Q8N239 644 aa27.29■■□□□ 1.96
UBE2D3-220ENST00000505307 HSP90AB1P08238 724 aaKnown RBP27.28■■□□□ 1.96
UBE2D3-220ENST00000505307 PLEKHO1Q53GL0 409 aaPredicted RBP27.27■■□□□ 1.96
UBE2D3-220ENST00000505307 AK7Q96M32 723 aa27.27■■□□□ 1.96
UBE2D3-220ENST00000505307 LOC102724428A0A0B4J2F2 783 aa27.26■■□□□ 1.95
UBE2D3-220ENST00000505307 SIK1P57059 783 aa27.26■■□□□ 1.95
UBE2D3-220ENST00000505307 AMOTQ4VCS5 1084 aa27.26■■□□□ 1.95
UBE2D3-220ENST00000505307 UTRNP46939 3433 aa27.26■■□□□ 1.95
UBE2D3-220ENST00000505307 TAF1LQ8IZX4 1826 aa27.25■■□□□ 1.95
UBE2D3-220ENST00000505307 ERVV-2B6SEH9 535 aa27.24■■□□□ 1.95
UBE2D3-220ENST00000505307 GPR162Q16538 588 aa27.23■■□□□ 1.95
UBE2D3-220ENST00000505307 DCAF5Q96JK2 942 aa27.23■■□□□ 1.95
UBE2D3-220ENST00000505307 C4BP0C0L5 1744 aa27.22■■□□□ 1.95
UBE2D3-220ENST00000505307 ASAP1Q9ULH1 1129 aa27.22■■□□□ 1.95
UBE2D3-220ENST00000505307 KIF7Q2M1P5 1343 aa27.21■■□□□ 1.95
UBE2D3-220ENST00000505307 AMER1Q5JTC6 1135 aaPredicted RBP27.21■■□□□ 1.95
UBE2D3-220ENST00000505307 SSFA2P28290 1259 aa27.2■■□□□ 1.94
UBE2D3-220ENST00000505307 MSL1Q68DK7 614 aa27.19■■□□□ 1.94
UBE2D3-220ENST00000505307 ATG3Q9NT62 314 aa27.19■■□□□ 1.94
UBE2D3-220ENST00000505307 ATP6V1AP38606 617 aa27.18■■□□□ 1.94
UBE2D3-220ENST00000505307 ZNF530Q6P9A1 599 aaPredicted RBP27.18■■□□□ 1.94
UBE2D3-220ENST00000505307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.17■■□□□ 1.94
UBE2D3-220ENST00000505307 LINC00116Q8NCU8 138 aa27.17■■□□□ 1.94
UBE2D3-220ENST00000505307 PELP1Q8IZL8 1130 aaKnown RBP27.16■■□□□ 1.94
UBE2D3-220ENST00000505307 NLGN2Q8NFZ4 835 aa27.16■■□□□ 1.94
UBE2D3-220ENST00000505307 CD2APQ9Y5K6 639 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms