RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 POU5F1BQ06416 359 aa9.09□□□□□ -0.95
CDH9-202ENST00000505020 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
CDH9-202ENST00000505020 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
CDH9-202ENST00000505020 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
CDH9-202ENST00000505020 ASB16Q96NS5 453 aa9.09□□□□□ -0.95
CDH9-202ENST00000505020 LZTS3O60299 673 aaPredicted RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 USP5P45974 858 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 CCSAPQ6IQ19 270 aaPredicted RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 NEUROD6Q96NK8 337 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 HMX1Q9NP08 348 aaPredicted RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 ENPP3O14638 875 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 PRPF38AQ8NAV1 312 aaKnown RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 RSPH9Q9H1X1 276 aaPredicted RBP9.08□□□□□ -0.96
CDH9-202ENST00000505020 ANO2Q9NQ90 1003 aa9.08□□□□□ -0.96
CDH9-202ENST00000505020 SPTLC1O15269 473 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 LILRB3O75022 631 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 ABL1P00519 1130 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 VDRP11473 427 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
CDH9-202ENST00000505020 SCP2P22307 547 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 MMP14P50281 582 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 FAM69CQ0P6D2 419 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 GNL2Q13823 731 aaKnown RBP9.07□□□□□ -0.96
CDH9-202ENST00000505020 AXDND1Q5T1B0 1012 aaPredicted RBP9.07□□□□□ -0.96
CDH9-202ENST00000505020 DDX46Q7L014 1031 aaKnown RBP9.07□□□□□ -0.96
CDH9-202ENST00000505020 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
CDH9-202ENST00000505020 CTDP1Q9Y5B0 961 aaPredicted RBP9.07□□□□□ -0.96
CDH9-202ENST00000505020 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 RASSF7Q02833 373 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 CCDC174Q6PII3 467 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
CDH9-202ENST00000505020 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 H3BRB1 525 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 IFRD1O00458 451 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 GNALP38405 381 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 HDAC1Q13547 482 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 NBPF20Q3BBV1 942 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 MSL3Q8N5Y2 521 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 ATL2Q8NHH9 583 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 CLP1Q92989 425 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 TYW1Q9NV66 732 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 TIMM44O43615 452 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 FANCCQ00597 558 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 ZNF211Q13398 564 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 ZRSR2Q15696 482 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 RSBN1LQ6PCB5 846 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 MRFAP1L1Q96HT8 127 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 FRMD6Q96NE9 622 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 ZHX3Q9H4I2 956 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 AVENQ9NQS1 362 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 THRAP3Q9Y2W1 955 aaKnown RBP9.05□□□□□ -0.96
CDH9-202ENST00000505020 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
CDH9-202ENST00000505020 RGS20O76081 388 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 GTF2E1P29083 439 aaPredicted RBP9.04□□□□□ -0.96
CDH9-202ENST00000505020 SOX11P35716 441 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 MAPRE1Q15691 268 aaKnown RBP9.04□□□□□ -0.96
CDH9-202ENST00000505020 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
CDH9-202ENST00000505020 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
CDH9-202ENST00000505020 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 LDHCP07864 332 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 PTGER2P43116 358 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 COL19A1Q14993 1142 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 SYCP2LQ5T4T6 812 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 NUTM2DQ5VT03 806 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 METTL3Q86U44 580 aaKnown RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 DRC7Q8IY82 874 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 TTC30BQ8N4P2 665 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 RNF34Q969K3 372 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 MKL1Q969V6 931 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 PPP1R12AO14974 1030 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 FOSP01100 380 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 FAM163BP0C2L3 166 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 ARID5AQ03989 594 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 WDR75Q8IWA0 830 aaKnown RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 RAVER1Q8IY67 606 aaKnown RBP9.03□□□□□ -0.96
CDH9-202ENST00000505020 CABLES1Q8TDN4 633 aa9.03□□□□□ -0.96
CDH9-202ENST00000505020 APBA2Q99767 749 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms