RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SPINT1O43278 529 aa6.19□□□□□ -1.42
RFC1-209ENST00000504974 DHX9Q08211 1270 aaKnown RBP6.19□□□□□ -1.42
RFC1-209ENST00000504974 HDGFL1Q5TGJ6 251 aa6.19□□□□□ -1.42
RFC1-209ENST00000504974 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
RFC1-209ENST00000504974 POLMQ9NP87 494 aaPredicted RBP6.19□□□□□ -1.42
RFC1-209ENST00000504974 CDV3Q9UKY7 258 aaKnown RBP6.19□□□□□ -1.42
RFC1-209ENST00000504974 PPFIA3O75145 1194 aa6.18□□□□□ -1.42
RFC1-209ENST00000504974 STAU1O95793 577 aaKnown RBP6.18□□□□□ -1.42
RFC1-209ENST00000504974 EIF4G2P78344 907 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFC1-209ENST00000504974 SEMA3FQ13275 785 aa6.18□□□□□ -1.42
RFC1-209ENST00000504974 ADH1AP07327 375 aa6.17□□□□□ -1.42
RFC1-209ENST00000504974 PTGIRP43119 386 aa6.17□□□□□ -1.42
RFC1-209ENST00000504974 PTSQ03393 145 aa6.17□□□□□ -1.42
RFC1-209ENST00000504974 FOXD4L5Q5VV16 416 aaPredicted RBP6.17□□□□□ -1.42
RFC1-209ENST00000504974 GPR161Q8N6U8 529 aaKnown RBP6.17□□□□□ -1.42
RFC1-209ENST00000504974 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
RFC1-209ENST00000504974 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
RFC1-209ENST00000504974 RHOQP17081 205 aa6.16□□□□□ -1.42
RFC1-209ENST00000504974 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
RFC1-209ENST00000504974 ADAMTS19Q8TE59 1207 aa6.16□□□□□ -1.42
RFC1-209ENST00000504974 CEP126Q9P2H0 1117 aa6.16□□□□□ -1.42
RFC1-209ENST00000504974 PCDHB11Q9Y5F2 797 aa6.16□□□□□ -1.42
RFC1-209ENST00000504974 WIPF1O43516 503 aa6.15□□□□□ -1.42
RFC1-209ENST00000504974 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
RFC1-209ENST00000504974 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
RFC1-209ENST00000504974 RAB6BQ9NRW1 208 aa6.15□□□□□ -1.42
RFC1-209ENST00000504974 SERPINA10Q9UK55 444 aa6.15□□□□□ -1.42
RFC1-209ENST00000504974 MEN1O00255 615 aa6.14□□□□□ -1.43
RFC1-209ENST00000504974 SOX11P35716 441 aa6.14□□□□□ -1.43
RFC1-209ENST00000504974 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.14□□□□□ -1.431e-5■□□□□ 9.3
RFC1-209ENST00000504974 CCDC155Q8N6L0 562 aa6.14□□□□□ -1.43
RFC1-209ENST00000504974 IRF7Q92985 503 aa6.14□□□□□ -1.43
RFC1-209ENST00000504974 SENP3-EIF4A1A0A087X0R7 540 aa6.13□□□□□ -1.43
RFC1-209ENST00000504974 A0A1W2PRU2 124 aa6.13□□□□□ -1.43
RFC1-209ENST00000504974 ATP5J2-PTCD1G3V325 749 aa6.13□□□□□ -1.43
RFC1-209ENST00000504974 OSBPL3Q9H4L5 887 aa6.13□□□□□ -1.43
RFC1-209ENST00000504974 ALG2Q9H553 416 aa6.13□□□□□ -1.43
RFC1-209ENST00000504974 CUEDC1Q9NWM3 386 aaPredicted RBP6.13□□□□□ -1.43
RFC1-209ENST00000504974 RFX1P22670 979 aa6.12□□□□□ -1.43
RFC1-209ENST00000504974 ERVK-9P63128 1117 aa6.12□□□□□ -1.43
RFC1-209ENST00000504974 KRT76Q01546 638 aa6.12□□□□□ -1.43
RFC1-209ENST00000504974 CC2D2BQ6DHV5 1058 aa6.12□□□□□ -1.43
RFC1-209ENST00000504974 SEPT12Q8IYM1 358 aa6.12□□□□□ -1.43
RFC1-209ENST00000504974 SLC35F4A4IF30 521 aa6.11□□□□□ -1.43
RFC1-209ENST00000504974 NPAS3Q8IXF0 933 aa6.11□□□□□ -1.43
RFC1-209ENST00000504974 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
RFC1-209ENST00000504974 ARHGEF10LQ9HCE6 1279 aa6.11□□□□□ -1.43
RFC1-209ENST00000504974 CDC14CA4D256 554 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 PIK3CDO00329 1044 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 POU4F2Q12837 409 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 RNFT1Q5M7Z0 435 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 PHTF2Q8N3S3 785 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 ZNF592Q92610 1267 aa6.1□□□□□ -1.43
RFC1-209ENST00000504974 PALM3A6NDB9 673 aaPredicted RBP6.09□□□□□ -1.43
RFC1-209ENST00000504974 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 LYSMD3Q7Z3D4 306 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 UCN2Q96RP3 112 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 CNTNAP3Q9BZ76 1288 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 PPP1R12CQ9BZL4 782 aa6.09□□□□□ -1.43
RFC1-209ENST00000504974 TFIP11Q9UBB9 837 aaKnown RBP6.09□□□□□ -1.43
RFC1-209ENST00000504974 IL2RAP01589 272 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 VSIG8P0DPA2 414 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 SKIP12755 728 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 ITGA6P23229 1130 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 LMOD1P29536 600 aaPredicted RBP6.08□□□□□ -1.44
RFC1-209ENST00000504974 TBC1D9Q6ZT07 1266 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 RNF135Q8IUD6 432 aa6.08□□□□□ -1.44
RFC1-209ENST00000504974 PHKA2P46019 1235 aa6.07□□□□□ -1.44
RFC1-209ENST00000504974 RNF144AP50876 292 aaPredicted RBP6.07□□□□□ -1.44
RFC1-209ENST00000504974 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
RFC1-209ENST00000504974 INSM1Q01101 510 aaPredicted RBP6.07□□□□□ -1.44
RFC1-209ENST00000504974 HOMEZQ8IX15 550 aa6.07□□□□□ -1.44
RFC1-209ENST00000504974 ZSCAN1Q8NBB4 408 aa6.07□□□□□ -1.44
RFC1-209ENST00000504974 COL25A1Q9BXS0 654 aaPredicted RBP6.07□□□□□ -1.44
RFC1-209ENST00000504974 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.06□□□□□ -1.44
RFC1-209ENST00000504974 GPR25O00155 361 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 CDCA8Q53HL2 280 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 DEPDC4Q8N2C3 294 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 CNKSR1Q969H4 720 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 NLRP3Q96P20 1036 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 ARXQ96QS3 562 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 DOLKQ9UPQ8 538 aa6.06□□□□□ -1.44
RFC1-209ENST00000504974 ATP9BO43861 1147 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 CENPCQ03188 943 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 CLN3Q13286 438 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 CFAP70Q5T0N1 1121 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 RIPOR1Q6ZS17 1223 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 CYP2U1Q7Z449 544 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 WHAMMQ8TF30 809 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 GAS2L1Q99501 681 aaPredicted RBP6.05□□□□□ -1.44
RFC1-209ENST00000504974 GRIP2Q9C0E4 1043 aa6.05□□□□□ -1.44
RFC1-209ENST00000504974 ESF1Q9H501 851 aaKnown RBP6.05□□□□□ -1.44
RFC1-209ENST00000504974 MAFBQ9Y5Q3 323 aaPredicted RBP6.05□□□□□ -1.44
RFC1-209ENST00000504974 USP17L3A6NCW0 530 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 USP17L4A6NCW7 530 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 USP17L5A8MUK1 530 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms