RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 ADGRL2O95490 1459 aa7.84□□□□□ -1.16
SNX25-203ENST00000504959 ABCC10Q5T3U5 1492 aa7.84□□□□□ -1.16
SNX25-203ENST00000504959 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 CFHP08603 1231 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 TSPY4P0CV99 314 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 TSPY10P0CW01 314 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 B4GALNT3Q6L9W6 998 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 SLAIN2Q9P270 581 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 CDC42BPBQ9Y5S2 1711 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 ANP32CO43423 234 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 NR1H3Q13133 447 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
SNX25-203ENST00000504959 KDM5BQ9UGL1 1544 aa7.82□□□□□ -1.16
SNX25-203ENST00000504959 PREX2Q70Z35 1606 aa7.82□□□□□ -1.16
SNX25-203ENST00000504959 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
SNX25-203ENST00000504959 SHANK2Q9UPX8 1470 aa7.82□□□□□ -1.16
SNX25-203ENST00000504959 RBM47A0AV96 593 aaKnown RBP7.81□□□□□ -1.16
SNX25-203ENST00000504959 ATP6V1AP38606 617 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
SNX25-203ENST00000504959 FAM174AQ8TBP5 190 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 ANKRD30BQ9BXX2 1392 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 C9orf84Q5VXU9 1444 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 RPRD2Q5VT52 1461 aaKnown RBP7.81□□□□□ -1.16
SNX25-203ENST00000504959 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 NOM1Q5C9Z4 860 aaKnown RBP7.81□□□□□ -1.16
SNX25-203ENST00000504959 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
SNX25-203ENST00000504959 RETREG3Q86VR2 466 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 ANKRD50Q9ULJ7 1429 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 ARHGEF5Q12774 1597 aa7.81□□□□□ -1.16
SNX25-203ENST00000504959 RIMBP3CA6NJZ7 1639 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 RIMBP3BA6NNM3 1639 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 RIMBP3Q9UFD9 1639 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 SKIP12755 728 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 SSFA2P28290 1259 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 HNRNPMP52272 730 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNX25-203ENST00000504959 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
SNX25-203ENST00000504959 ABCC2Q92887 1545 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 PZPP20742 1482 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 ZBBXA8MT70 800 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 PTPN5P54829 565 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 MRPL50Q8N5N7 158 aaKnown RBP7.79□□□□□ -1.16
SNX25-203ENST00000504959 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
SNX25-203ENST00000504959 ERCC6L2Q5T890 1561 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 SAMD9LQ8IVG5 1584 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 ARHGAP5Q13017 1502 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L10C9JJH3 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L21D6R901 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
SNX25-203ENST00000504959 FAM69CQ0P6D2 419 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 PUS10Q3MIT2 529 aaKnown RBP7.79□□□□□ -1.16
SNX25-203ENST00000504959 NFATC2IPQ8NCF5 419 aa7.79□□□□□ -1.16
SNX25-203ENST00000504959 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 GOLGA8CPA6NN73 597 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 DESI1Q6ICB0 168 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 LYPD8Q6UX82 237 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 SAMD7Q7Z3H4 446 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 NBPF3Q9H094 633 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 USP35Q9P2H5 1018 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 RABGEF1Q9UJ41 708 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 TTC37Q6PGP7 1564 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 CCDC141Q6ZP82 1450 aa7.78□□□□□ -1.16
SNX25-203ENST00000504959 NUP155O75694 1391 aa7.77□□□□□ -1.16
SNX25-203ENST00000504959 ZCCHC11Q5TAX3 1644 aaKnown RBP7.77□□□□□ -1.17
SNX25-203ENST00000504959 FAM196BA6NMK8 535 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 RNF40O75150 1001 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 SCNN1AP37088 669 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 SERPINB4P48594 390 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 PLEKHM2Q8IWE5 1019 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 WNT2BQ93097 391 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
SNX25-203ENST00000504959 SLC27A5Q9Y2P5 690 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX25-203ENST00000504959 POLR1AO95602 1720 aaPredicted RBP7.77□□□□□ -1.17
SNX25-203ENST00000504959 KIF15Q9NS87 1388 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
SNX25-203ENST00000504959 MORN1Q5T089 497 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 FKBPLQ9UIM3 349 aa7.77□□□□□ -1.17
SNX25-203ENST00000504959 TEX14Q8IWB6 1497 aa7.76□□□□□ -1.17
SNX25-203ENST00000504959 SYCP2Q9BX26 1530 aa7.76□□□□□ -1.17
SNX25-203ENST00000504959 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
SNX25-203ENST00000504959 PTK7Q13308 1070 aa7.76□□□□□ -1.17
SNX25-203ENST00000504959 FAM98CQ17RN3 349 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms