RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
RNF4-206ENST00000504782 ZBTB7AO95365 584 aa17.77■□□□□ 0.44
RNF4-206ENST00000504782 SLC15A2Q16348 729 aa17.77■□□□□ 0.44
RNF4-206ENST00000504782 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.44
RNF4-206ENST00000504782 ANKRD26Q9UPS8 1709 aa17.77■□□□□ 0.44
RNF4-206ENST00000504782 INSRP06213 1382 aa17.77■□□□□ 0.43
RNF4-206ENST00000504782 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
RNF4-206ENST00000504782 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
RNF4-206ENST00000504782 FLT4P35916 1363 aa17.76■□□□□ 0.43
RNF4-206ENST00000504782 KCNQ4P56696 695 aa17.75■□□□□ 0.43
RNF4-206ENST00000504782 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
RNF4-206ENST00000504782 NSD2O96028 1365 aa17.75■□□□□ 0.43
RNF4-206ENST00000504782 EIF4G2P78344 907 aaKnown RBP eCLIP17.74■□□□□ 0.43
RNF4-206ENST00000504782 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
RNF4-206ENST00000504782 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
RNF4-206ENST00000504782 LY75O60449 1722 aa17.74■□□□□ 0.43
RNF4-206ENST00000504782 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
RNF4-206ENST00000504782 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
RNF4-206ENST00000504782 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
RNF4-206ENST00000504782 PPP1R1BQ9UD71 204 aaPredicted RBP17.73■□□□□ 0.43
RNF4-206ENST00000504782 PTGER2P43116 358 aa17.72■□□□□ 0.43
RNF4-206ENST00000504782 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
RNF4-206ENST00000504782 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
RNF4-206ENST00000504782 TOGARAM1Q9Y4F4 1720 aa17.71■□□□□ 0.43
RNF4-206ENST00000504782 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.42
RNF4-206ENST00000504782 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
RNF4-206ENST00000504782 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
RNF4-206ENST00000504782 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
RNF4-206ENST00000504782 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
RNF4-206ENST00000504782 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
RNF4-206ENST00000504782 PANK3Q9H999 370 aa17.69■□□□□ 0.42
RNF4-206ENST00000504782 ITGB4P16144 1822 aa17.69■□□□□ 0.42
RNF4-206ENST00000504782 CYP27B1O15528 508 aa17.68■□□□□ 0.42
RNF4-206ENST00000504782 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
RNF4-206ENST00000504782 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
RNF4-206ENST00000504782 NCAPD2Q15021 1401 aa17.67■□□□□ 0.42
RNF4-206ENST00000504782 EYA1Q99502 592 aa17.67■□□□□ 0.42
RNF4-206ENST00000504782 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
RNF4-206ENST00000504782 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
RNF4-206ENST00000504782 MTFR1LQ9H019 292 aa17.65■□□□□ 0.42
RNF4-206ENST00000504782 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
RNF4-206ENST00000504782 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
RNF4-206ENST00000504782 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
RNF4-206ENST00000504782 PNPLA7Q6ZV29 1317 aa17.63■□□□□ 0.41
RNF4-206ENST00000504782 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
RNF4-206ENST00000504782 C5P01031 1676 aa17.62■□□□□ 0.41
RNF4-206ENST00000504782 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
RNF4-206ENST00000504782 MPRIPQ6WCQ1 1025 aa17.62■□□□□ 0.41
RNF4-206ENST00000504782 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
RNF4-206ENST00000504782 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
RNF4-206ENST00000504782 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
RNF4-206ENST00000504782 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
RNF4-206ENST00000504782 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
RNF4-206ENST00000504782 PIGBQ92521 554 aa17.58■□□□□ 0.4
RNF4-206ENST00000504782 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
RNF4-206ENST00000504782 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
RNF4-206ENST00000504782 ARXQ96QS3 562 aa17.57■□□□□ 0.4
RNF4-206ENST00000504782 SPG7Q9UQ90 795 aa17.57■□□□□ 0.4
RNF4-206ENST00000504782 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
RNF4-206ENST00000504782 COL23A1Q86Y22 540 aaPredicted RBP17.56■□□□□ 0.4
RNF4-206ENST00000504782 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
RNF4-206ENST00000504782 PHKG2P15735 406 aa17.55■□□□□ 0.4
RNF4-206ENST00000504782 SMIM5Q71RC9 77 aa17.55■□□□□ 0.4
RNF4-206ENST00000504782 AMIGO3Q86WK7 504 aa17.54■□□□□ 0.4
RNF4-206ENST00000504782 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
RNF4-206ENST00000504782 YY1P25490 414 aa17.53■□□□□ 0.4
RNF4-206ENST00000504782 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
RNF4-206ENST00000504782 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
RNF4-206ENST00000504782 SLC16A10Q8TF71 515 aa17.53■□□□□ 0.4
RNF4-206ENST00000504782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF4-206ENST00000504782 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
RNF4-206ENST00000504782 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.4
RNF4-206ENST00000504782 MSH5O43196 834 aa17.52■□□□□ 0.4
RNF4-206ENST00000504782 IFNL2Q8IZJ0 200 aa17.52■□□□□ 0.4
RNF4-206ENST00000504782 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.4
RNF4-206ENST00000504782 MSL1Q68DK7 614 aa17.51■□□□□ 0.39
RNF4-206ENST00000504782 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
RNF4-206ENST00000504782 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
RNF4-206ENST00000504782 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
RNF4-206ENST00000504782 LINC00116Q8NCU8 138 aa17.49■□□□□ 0.39
RNF4-206ENST00000504782 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
RNF4-206ENST00000504782 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
RNF4-206ENST00000504782 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
RNF4-206ENST00000504782 UTRNP46939 3433 aa17.49■□□□□ 0.39
RNF4-206ENST00000504782 POLD1P28340 1107 aa17.48■□□□□ 0.39
RNF4-206ENST00000504782 IL13P35225 146 aa17.48■□□□□ 0.39
RNF4-206ENST00000504782 ITPK1Q13572 414 aa17.48■□□□□ 0.39
RNF4-206ENST00000504782 NLGN2Q8NFZ4 835 aa17.48■□□□□ 0.39
RNF4-206ENST00000504782 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
RNF4-206ENST00000504782 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
RNF4-206ENST00000504782 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
RNF4-206ENST00000504782 SIK1P57059 783 aa17.47■□□□□ 0.39
RNF4-206ENST00000504782 PHF14O94880 888 aa17.46■□□□□ 0.39
RNF4-206ENST00000504782 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
RNF4-206ENST00000504782 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
RNF4-206ENST00000504782 CHD4Q14839 1912 aa17.45■□□□□ 0.38
RNF4-206ENST00000504782 MTHFSP49914 203 aa17.45■□□□□ 0.38
RNF4-206ENST00000504782 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
RNF4-206ENST00000504782 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
RNF4-206ENST00000504782 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms