RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
RFC1-207ENST00000504554 EP400Q96L91 3159 aa11.25□□□□□ -0.61
RFC1-207ENST00000504554 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
RFC1-207ENST00000504554 SOX12O15370 315 aa11.25□□□□□ -0.61
RFC1-207ENST00000504554 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
RFC1-207ENST00000504554 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
RFC1-207ENST00000504554 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
RFC1-207ENST00000504554 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
RFC1-207ENST00000504554 ZBTB7CA1YPR0 619 aa11.24□□□□□ -0.61
RFC1-207ENST00000504554 SPATA31A1Q5TZJ5 1347 aa11.24□□□□□ -0.61
RFC1-207ENST00000504554 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
RFC1-207ENST00000504554 TMF1P82094 1093 aa11.23□□□□□ -0.61
RFC1-207ENST00000504554 HDGFL2Q7Z4V5 671 aaPredicted RBP11.23□□□□□ -0.61
RFC1-207ENST00000504554 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
RFC1-207ENST00000504554 NFAT5O94916 1531 aa11.23□□□□□ -0.61
RFC1-207ENST00000504554 COL5A2P05997 1499 aaPredicted RBP11.22□□□□□ -0.61
RFC1-207ENST00000504554 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
RFC1-207ENST00000504554 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
RFC1-207ENST00000504554 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
RFC1-207ENST00000504554 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
RFC1-207ENST00000504554 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
RFC1-207ENST00000504554 COL18A1P39060 1754 aa11.21□□□□□ -0.61
RFC1-207ENST00000504554 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
RFC1-207ENST00000504554 FBLN1P23142 703 aa11.21□□□□□ -0.61
RFC1-207ENST00000504554 EVA1CP58658 441 aa11.21□□□□□ -0.61
RFC1-207ENST00000504554 FAM182BQ5T319 152 aa11.21□□□□□ -0.61
RFC1-207ENST00000504554 USP35Q9P2H5 1018 aa11.21□□□□□ -0.61
RFC1-207ENST00000504554 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.62
RFC1-207ENST00000504554 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 ST18O60284 1047 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
RFC1-207ENST00000504554 KRT27Q7Z3Y8 459 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
RFC1-207ENST00000504554 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
RFC1-207ENST00000504554 A0A0G2JS52 829 aa11.19□□□□□ -0.62
RFC1-207ENST00000504554 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
RFC1-207ENST00000504554 MYT1Q01538 1121 aa11.19□□□□□ -0.62
RFC1-207ENST00000504554 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
RFC1-207ENST00000504554 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
RFC1-207ENST00000504554 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
RFC1-207ENST00000504554 FYB1O15117 783 aa11.17□□□□□ -0.62
RFC1-207ENST00000504554 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
RFC1-207ENST00000504554 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
RFC1-207ENST00000504554 TCP11L2Q8N4U5 519 aa11.17□□□□□ -0.62
RFC1-207ENST00000504554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■■■■□ 19.3
RFC1-207ENST00000504554 MYOM1P52179 1685 aa11.17□□□□□ -0.62
RFC1-207ENST00000504554 CRB1P82279 1406 aa11.17□□□□□ -0.62
RFC1-207ENST00000504554 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
RFC1-207ENST00000504554 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
RFC1-207ENST00000504554 GGNBP2Q9H3C7 697 aa11.16□□□□□ -0.62
RFC1-207ENST00000504554 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
RFC1-207ENST00000504554 TOM1L2Q6ZVM7 507 aa11.15□□□□□ -0.62
RFC1-207ENST00000504554 DEFB132Q7Z7B7 95 aa11.15□□□□□ -0.62
RFC1-207ENST00000504554 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
RFC1-207ENST00000504554 THRAP3Q9Y2W1 955 aaKnown RBP11.14□□□□□ -0.63
RFC1-207ENST00000504554 BLMP54132 1417 aaPredicted RBP11.14□□□□□ -0.63
RFC1-207ENST00000504554 NSD3Q9BZ95 1437 aa11.14□□□□□ -0.63
RFC1-207ENST00000504554 ERBB3P21860 1342 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 MAP3K19Q56UN5 1328 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 DISP2A7MBM2 1401 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 RRS1Q15050 365 aaKnown RBP11.13□□□□□ -0.63
RFC1-207ENST00000504554 COG3Q96JB2 828 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
RFC1-207ENST00000504554 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RFC1-207ENST00000504554 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 IP6K1Q92551 441 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 ABCC6O95255 1503 aa11.12□□□□□ -0.63
RFC1-207ENST00000504554 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
RFC1-207ENST00000504554 HOXC9P31274 260 aa11.1□□□□□ -0.63
RFC1-207ENST00000504554 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
RFC1-207ENST00000504554 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
RFC1-207ENST00000504554 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
RFC1-207ENST00000504554 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
RFC1-207ENST00000504554 LTN1O94822 1766 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 TRIM37O94972 964 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
RFC1-207ENST00000504554 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
RFC1-207ENST00000504554 PANK3Q9H999 370 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 NLRP2Q9NX02 1062 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
RFC1-207ENST00000504554 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
RFC1-207ENST00000504554 SNPHO15079 494 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 AMPHP49418 695 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
RFC1-207ENST00000504554 DDB1Q16531 1140 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 HS6ST3Q8IZP7 471 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
RFC1-207ENST00000504554 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms