RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 C1orf167Q5SNV9 1468 aa12.44□□□□□ -0.42
COL1A1-210ENST00000504289 PTPRCP08575 1304 aa12.43□□□□□ -0.42
COL1A1-210ENST00000504289 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
COL1A1-210ENST00000504289 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
COL1A1-210ENST00000504289 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
COL1A1-210ENST00000504289 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
COL1A1-210ENST00000504289 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
COL1A1-210ENST00000504289 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
COL1A1-210ENST00000504289 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
COL1A1-210ENST00000504289 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
COL1A1-210ENST00000504289 LRRC37A3O60309 1634 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 DDRGK1Q96HY6 314 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 TRPM3Q9HCF6 1732 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-210ENST00000504289 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 LTN1O94822 1766 aa12.41□□□□□ -0.42
COL1A1-210ENST00000504289 ZBTB7BO15156 539 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-210ENST00000504289 SOX12O15370 315 aa12.4□□□□□ -0.42
COL1A1-210ENST00000504289 ATF3P18847 181 aa12.4□□□□□ -0.42
COL1A1-210ENST00000504289 INTS3Q68E01 1043 aaKnown RBP12.4□□□□□ -0.42
COL1A1-210ENST00000504289 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
COL1A1-210ENST00000504289 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
COL1A1-210ENST00000504289 ABCC6O95255 1503 aa12.4□□□□□ -0.42
COL1A1-210ENST00000504289 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 GCP02774 474 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 MCM10Q7L590 875 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
COL1A1-210ENST00000504289 MSH5O43196 834 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-210ENST00000504289 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
COL1A1-210ENST00000504289 FOXO3O43524 673 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 HOXB7P09629 217 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 RGS3P49796 1198 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
COL1A1-210ENST00000504289 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
COL1A1-210ENST00000504289 ALS2Q96Q42 1657 aa12.36□□□□□ -0.43
COL1A1-210ENST00000504289 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
COL1A1-210ENST00000504289 MSH6P52701 1360 aa12.36□□□□□ -0.43
COL1A1-210ENST00000504289 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-210ENST00000504289 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-210ENST00000504289 VIRMAQ69YN4 1812 aaKnown RBP12.36□□□□□ -0.43
COL1A1-210ENST00000504289 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
COL1A1-210ENST00000504289 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
COL1A1-210ENST00000504289 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
COL1A1-210ENST00000504289 ELL2O00472 640 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-210ENST00000504289 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
COL1A1-210ENST00000504289 NUCB1Q02818 461 aa12.34□□□□□ -0.43
COL1A1-210ENST00000504289 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
COL1A1-210ENST00000504289 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-210ENST00000504289 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
COL1A1-210ENST00000504289 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
COL1A1-210ENST00000504289 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-210ENST00000504289 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
COL1A1-210ENST00000504289 RBM33Q96EV2 1170 aaKnown RBP12.33□□□□□ -0.44
COL1A1-210ENST00000504289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL1A1-210ENST00000504289 RGS12O14924 1447 aa12.33□□□□□ -0.44
COL1A1-210ENST00000504289 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
COL1A1-210ENST00000504289 SOCS7O14512 581 aa12.32□□□□□ -0.44
COL1A1-210ENST00000504289 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
COL1A1-210ENST00000504289 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
COL1A1-210ENST00000504289 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
COL1A1-210ENST00000504289 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
COL1A1-210ENST00000504289 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-210ENST00000504289 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
COL1A1-210ENST00000504289 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
COL1A1-210ENST00000504289 CPDO75976 1380 aa12.3□□□□□ -0.44
COL1A1-210ENST00000504289 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
COL1A1-210ENST00000504289 CHD1LQ86WJ1 897 aa12.3□□□□□ -0.44
COL1A1-210ENST00000504289 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
COL1A1-210ENST00000504289 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
COL1A1-210ENST00000504289 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
COL1A1-210ENST00000504289 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
COL1A1-210ENST00000504289 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
COL1A1-210ENST00000504289 ERBB3P21860 1342 aa12.29□□□□□ -0.44
COL1A1-210ENST00000504289 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
COL1A1-210ENST00000504289 PXDNQ92626 1479 aa12.28□□□□□ -0.44
COL1A1-210ENST00000504289 HMMRO75330 724 aa12.28□□□□□ -0.44
COL1A1-210ENST00000504289 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
COL1A1-210ENST00000504289 ADAMTS7Q9UKP4 1686 aa12.28□□□□□ -0.44
COL1A1-210ENST00000504289 GNAI3P08754 354 aa12.27□□□□□ -0.45
COL1A1-210ENST00000504289 TEFQ10587 303 aa12.27□□□□□ -0.45
COL1A1-210ENST00000504289 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
COL1A1-210ENST00000504289 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
COL1A1-210ENST00000504289 NPM2Q86SE8 214 aaKnown RBP12.27□□□□□ -0.45
COL1A1-210ENST00000504289 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms