RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 USP4Q13107 963 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 CBLBQ13191 982 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 CDCA8Q53HL2 280 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 CFAP70Q5T0N1 1121 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 UCN2Q96RP3 112 aa9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 ADH1AP07327 375 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 SKIP12755 728 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 BMP1P13497 986 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 TRIM46Q7Z4K8 759 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
TRAPPC13-205ENST00000504243 ATP9BO43861 1147 aa9.03□□□□□ -0.96
TRAPPC13-205ENST00000504243 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
TRAPPC13-205ENST00000504243 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
TRAPPC13-205ENST00000504243 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 BMP2P12643 396 aa9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 OXLD1Q5BKU9 147 aa9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 CDCA7Q9BWT1 371 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC13-205ENST00000504243 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 SCTRP47872 440 aa9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 EML3Q32P44 896 aa9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
TRAPPC13-205ENST00000504243 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 PTGIRP43119 386 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 RELBQ01201 579 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 ZNF787Q6DD87 383 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
TRAPPC13-205ENST00000504243 C11orf95C9JLR9 678 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 SPINT1O43278 529 aa8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 DEPDC4Q8N2C3 294 aa8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 AGBL1Q96MI9 1066 aa8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
TRAPPC13-205ENST00000504243 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
TRAPPC13-205ENST00000504243 PDE4CQ08493 712 aa8.98□□□□□ -0.97
TRAPPC13-205ENST00000504243 PLEKHM2Q8IWE5 1019 aa8.98□□□□□ -0.97
TRAPPC13-205ENST00000504243 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
TRAPPC13-205ENST00000504243 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 GNRH1P01148 92 aa8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 KDF1Q8NAX2 398 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC13-205ENST00000504243 NCOA4Q13772 614 aa8.96□□□□□ -0.98
TRAPPC13-205ENST00000504243 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC13-205ENST00000504243 ZBTB7CA1YPR0 619 aa8.95□□□□□ -0.98
TRAPPC13-205ENST00000504243 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC13-205ENST00000504243 AEBP1Q8IUX7 1158 aa8.95□□□□□ -0.98
TRAPPC13-205ENST00000504243 A0A1W2PRU2 124 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 TTLL8A6PVC2 850 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 POTECB2RU33 542 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 TRIM50Q86XT4 487 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 NLRP3Q96P20 1036 aa8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 POLMQ9NP87 494 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 SOS2Q07890 1332 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-205ENST00000504243 MAN1A2O60476 641 aa8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 CLN3Q13286 438 aa8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 INSM2Q96T92 566 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 TRAIPQ9BWF2 469 aa8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 MKRN1Q9UHC7 482 aaKnown RBP8.93□□□□□ -0.98
TRAPPC13-205ENST00000504243 MEN1O00255 615 aa8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 SNRPBP14678 240 aaKnown RBP8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 GPC1P35052 558 aa8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 ATP1A2P50993 1020 aa8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 GTF2IP78347 998 aa8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 LARP1Q6PKG0 1096 aaKnown RBP8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
TRAPPC13-205ENST00000504243 RASA1P20936 1047 aa8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 CTSOP43234 321 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 RNF144AP50876 292 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 PCDHGA11Q9Y5H2 935 aa8.91□□□□□ -0.98
TRAPPC13-205ENST00000504243 ATG7O95352 703 aa8.9□□□□□ -0.98
TRAPPC13-205ENST00000504243 CNKSR1Q969H4 720 aa8.9□□□□□ -0.98
TRAPPC13-205ENST00000504243 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
TRAPPC13-205ENST00000504243 CARNS1A5YM72 827 aa8.89□□□□□ -0.99
TRAPPC13-205ENST00000504243 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
TRAPPC13-205ENST00000504243 RAB6BQ9NRW1 208 aa8.89□□□□□ -0.99
TRAPPC13-205ENST00000504243 FIGNL2A6NMB9 653 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 WASLO00401 505 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 IL2RAP01589 272 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 INHAP05111 366 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 GDF10P55107 478 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 PSME1Q06323 249 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms