RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CAPN15O75808 1086 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 MFAP1P55081 439 aaKnown RBP4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 NLRP13Q86W25 1043 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 HSCBQ8IWL3 235 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 TNRQ92752 1358 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 CFAP53Q96M91 514 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 MPHOSPH9Q99550 1183 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 FAM13BQ9NYF5 915 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 RCAN3Q9UKA8 241 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 PPLO60437 1756 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 HFM1A2PYH4 1435 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 C8orf34Q49A92 452 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 TSC1Q92574 1164 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 CALR3Q96L12 384 aaKnown RBP4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 RAB3GAP2Q9H2M9 1393 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 MAPK8IP3Q9UPT6 1336 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 TESPA1A2RU30 521 aaPredicted RBP4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 DYNC1I1O14576 645 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 DDIT3P35638 169 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 ANKRD7Q92527 254 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 KIF1BO60333 1816 aa4.52□□□□□ -1.69
PCDH11X-208ENST00000504220 ANKRD50Q9ULJ7 1429 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 ARID4AP29374 1257 aaPredicted RBP4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 DRC7Q8IY82 874 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 ATL2Q8NHH9 583 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 BCL2L13Q9BXK5 485 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 DMRT2Q9Y5R5 561 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 CLTCL1P53675 1640 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 ZFYVE9O95405 1425 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 PRAG1Q86YV5 1406 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 XRN1Q8IZH2 1706 aaKnown RBP4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 CBX1P83916 185 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 TBC1D25Q3MII6 688 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 CCDC146Q8IYE0 955 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 ZNF232Q9UNY5 417 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 SETBP1Q9Y6X0 1596 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 SMG6Q86US8 1419 aaKnown RBP4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6L4A6NEF3 574 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 CD151P48509 253 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 MED4Q9NPJ6 270 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 NAIPQ13075 1403 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 SETD5Q9C0A6 1442 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 KANK1Q14678 1352 aa4.51□□□□□ -1.69
PCDH11X-208ENST00000504220 IPO8O15397 1037 aaKnown RBP4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 GUCY2CP25092 1073 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 SSFA2P28290 1259 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 NYAP1Q6ZVC0 841 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 KNDC1Q76NI1 1749 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6L3A6NEY3 463 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 RBM6P78332 1123 aaKnown RBP4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 NBPF6Q5VWK0 638 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 NBPF4Q96M43 638 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 SMC4Q9NTJ3 1288 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 LRRC10BA6NIK2 292 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 HMGB1P09429 215 aaKnown RBP4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 MAF1Q9H063 256 aa4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 TSPYL2Q9H2G4 693 aaPredicted RBP4.5□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLIM4O00461 696 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 BRD1O95696 1058 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 APPP05067 770 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 LMOD3Q0VAK6 560 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 FBXO31Q5XUX0 539 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 CASC1Q6TDU7 716 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 EXOC6Q8TAG9 804 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 PDLIM2Q96JY6 352 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 LCMT1Q9UIC8 334 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 NEXMIFQ5QGS0 1516 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 LAMC1P11047 1609 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 NCOA3Q9Y6Q9 1424 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 ELL2O00472 640 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 PAX7P23759 505 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 RHBDL3P58872 404 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 L1TD1Q5T7N2 865 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 RRP7AQ9Y3A4 280 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 PCDHGA4Q9Y5G9 962 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 UQCRHLA0A096LP55 91 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 IGHDP01880 384 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 UQCRHP07919 91 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 JMYQ8N9B5 988 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 GPT2Q8TD30 523 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 SMC3Q9UQE7 1217 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 NUDCQ9Y266 331 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 SCAF11Q99590 1463 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 U2AF1L5P0DN76 240 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 U2AF1Q01081 240 aaKnown RBP eCLIP4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 ITPRIPQ8IWB1 547 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 FAM212AQ96EL1 285 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 RIPOR2Q9Y4F9 1068 aa4.49□□□□□ -1.69
PCDH11X-208ENST00000504220 SLC27A2O14975 620 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 NAT1P18440 290 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 MORC1Q86VD1 984 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 KDM4CQ9H3R0 1056 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 TERF2IPQ9NYB0 399 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 NUTM2FA1L443 756 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 TDO2P48775 406 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 EXOC8Q8IYI6 725 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 POLKQ9UBT6 870 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms