RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 IRF5Q13568 498 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 C17orf53Q8N3J3 647 aaPredicted RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 PDLIM2Q96JY6 352 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ERBINQ96RT1 1412 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 TRIM6-TRIM34B2RNG4 842 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 KDM4CQ9H3R0 1056 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 REC8O95072 547 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 POLA2Q14181 598 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 TMEM51Q9NW97 253 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 KRT222Q8N1A0 295 aa8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 ZFP91Q96JP5 570 aaPredicted RBP8.36□□□□□ -1.07
SH3TC2-204ENST00000504091 ANKRD50Q9ULJ7 1429 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 UBAP1LF5GYI3 381 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 CEP170BQ9Y4F5 1589 aaPredicted RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 ATF7IPQ6VMQ6 1270 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 ZNF521Q96K83 1311 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
SH3TC2-204ENST00000504091 NPHP1O15259 732 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 NEK4P51957 841 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 GPS2Q13227 327 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 TRMT2AQ8IZ69 625 aaKnown RBP8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 TMEM63CQ9P1W3 806 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 GCC1Q96CN9 775 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 NOB1Q9ULX3 412 aaKnown RBP8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 CAMSAP2Q08AD1 1489 aa8.34□□□□□ -1.07
SH3TC2-204ENST00000504091 ABCC5O15440 1437 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 PIP4K2BP78356 416 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 PROM2Q8N271 834 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 C16orf45Q96MC5 204 aaPredicted RBP8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 A2ML1A8K2U0 1454 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 NRDCO43847 1150 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 PLEKHD1A6NEE1 506 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
SH3TC2-204ENST00000504091 CAMSAP1Q5T5Y3 1602 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 TNNT1P13805 278 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 ATP6V1DQ9Y5K8 247 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 NUCB1Q02818 461 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 TRIM27P14373 513 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
SH3TC2-204ENST00000504091 GTF2F1P35269 517 aaKnown RBP eCLIP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 GPT2Q8TD30 523 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 GDPD2Q9HCC8 539 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 KIDINS220Q9ULH0 1771 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 ZGPATQ8N5A5 531 aaKnown RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 CWC15Q9P013 229 aaKnown RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 ZNF710Q8N1W2 664 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 NOL10Q9BSC4 688 aaKnown RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 CT47B1P0C2W7 299 aaPredicted RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 MCM2P49736 904 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 FKBP5Q13451 457 aaPredicted RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 CCDC183Q5T5S1 534 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 CDK13Q14004 1512 aaKnown RBP8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 GPRASP1Q5JY77 1395 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 VWDEQ8N2E2 1590 aa8.31□□□□□ -1.08
SH3TC2-204ENST00000504091 TESK2Q96S53 571 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 SCAPERQ9BY12 1400 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 PKP1Q13835 747 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 NOM1Q5C9Z4 860 aaKnown RBP8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 SSH1Q8WYL5 1049 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 KDM4AO75164 1064 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 ARGLU1Q9NWB6 273 aaPredicted RBP8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 NLRP1Q9C000 1473 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 FIBPO43427 364 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 ILDR2Q71H61 639 aa8.3□□□□□ -1.08
SH3TC2-204ENST00000504091 CDK12Q9NYV4 1490 aaPredicted RBP8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 DDIT3P35638 169 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 PAXBP1Q9Y5B6 917 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 CDC42BPBQ9Y5S2 1711 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 CCDC192P0DO97 292 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 ZRSR1Q15695 479 aaKnown RBP8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 NEURL4Q96JN8 1562 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 KDM5DQ9BY66 1539 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 GCC2Q8IWJ2 1684 aa8.29□□□□□ -1.08
SH3TC2-204ENST00000504091 EIF2AK4Q9P2K8 1649 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms