RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
SGCA-204ENST00000504073 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
SGCA-204ENST00000504073 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
SGCA-204ENST00000504073 STRN4Q9NRL3 753 aa19.68■□□□□ 0.74
SGCA-204ENST00000504073 BTG4Q9NY30 223 aa19.68■□□□□ 0.74
SGCA-204ENST00000504073 USP21Q9UK80 565 aa19.68■□□□□ 0.74
SGCA-204ENST00000504073 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
SGCA-204ENST00000504073 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
SGCA-204ENST00000504073 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
SGCA-204ENST00000504073 CARD10Q9BWT7 1032 aa19.67■□□□□ 0.74
SGCA-204ENST00000504073 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
SGCA-204ENST00000504073 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
SGCA-204ENST00000504073 TRPC5Q9UL62 973 aaPredicted RBP19.66■□□□□ 0.74
SGCA-204ENST00000504073 SPG7Q9UQ90 795 aa19.66■□□□□ 0.74
SGCA-204ENST00000504073 IL16Q14005 1332 aa19.66■□□□□ 0.74
SGCA-204ENST00000504073 ZNF521Q96K83 1311 aa19.66■□□□□ 0.74
SGCA-204ENST00000504073 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
SGCA-204ENST00000504073 C1orf141Q5JVX7 400 aa19.65■□□□□ 0.74
SGCA-204ENST00000504073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGCA-204ENST00000504073 CRB1P82279 1406 aa19.65■□□□□ 0.74
SGCA-204ENST00000504073 CCDC125Q86Z20 511 aa19.64■□□□□ 0.73
SGCA-204ENST00000504073 ATRNO75882 1429 aa19.64■□□□□ 0.73
SGCA-204ENST00000504073 NWD2Q9ULI1 1742 aa19.63■□□□□ 0.73
SGCA-204ENST00000504073 GNAT3A8MTJ3 354 aa19.62■□□□□ 0.73
SGCA-204ENST00000504073 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
SGCA-204ENST00000504073 PLCH1Q4KWH8 1693 aa19.62■□□□□ 0.73
SGCA-204ENST00000504073 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
SGCA-204ENST00000504073 CDCA7Q9BWT1 371 aaPredicted RBP19.61■□□□□ 0.73
SGCA-204ENST00000504073 TRIM35Q9UPQ4 493 aa19.61■□□□□ 0.73
SGCA-204ENST00000504073 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
SGCA-204ENST00000504073 IL2RBP14784 551 aa19.6■□□□□ 0.73
SGCA-204ENST00000504073 GNAI1P63096 354 aa19.6■□□□□ 0.73
SGCA-204ENST00000504073 SLFN5Q08AF3 891 aa19.6■□□□□ 0.73
SGCA-204ENST00000504073 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
SGCA-204ENST00000504073 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
SGCA-204ENST00000504073 LARP1Q6PKG0 1096 aaKnown RBP19.6■□□□□ 0.73
SGCA-204ENST00000504073 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
SGCA-204ENST00000504073 LRP5O75197 1615 aa19.6■□□□□ 0.73
SGCA-204ENST00000504073 DLG5Q8TDM6 1919 aa19.59■□□□□ 0.73
SGCA-204ENST00000504073 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
SGCA-204ENST00000504073 THRAP3Q9Y2W1 955 aaKnown RBP19.59■□□□□ 0.73
SGCA-204ENST00000504073 SLIT2O94813 1529 aa19.57■□□□□ 0.72
SGCA-204ENST00000504073 UNC5CLQ8IV45 518 aa19.57■□□□□ 0.72
SGCA-204ENST00000504073 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
SGCA-204ENST00000504073 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
SGCA-204ENST00000504073 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
SGCA-204ENST00000504073 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
SGCA-204ENST00000504073 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
SGCA-204ENST00000504073 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
SGCA-204ENST00000504073 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
SGCA-204ENST00000504073 CT47B1P0C2W7 299 aaPredicted RBP19.55■□□□□ 0.72
SGCA-204ENST00000504073 IFNL2Q8IZJ0 200 aa19.55■□□□□ 0.72
SGCA-204ENST00000504073 NRAPQ86VF7 1730 aa19.54■□□□□ 0.72
SGCA-204ENST00000504073 DUSP27Q5VZP5 1158 aa19.54■□□□□ 0.72
SGCA-204ENST00000504073 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
SGCA-204ENST00000504073 CFAP44Q96MT7 982 aa19.54■□□□□ 0.72
SGCA-204ENST00000504073 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
SGCA-204ENST00000504073 MEGF6O75095 1541 aa19.53■□□□□ 0.72
SGCA-204ENST00000504073 NEFLP07196 543 aa19.53■□□□□ 0.72
SGCA-204ENST00000504073 TRMT2AQ8IZ69 625 aaKnown RBP19.53■□□□□ 0.72
SGCA-204ENST00000504073 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
SGCA-204ENST00000504073 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
SGCA-204ENST00000504073 BCL9LQ86UU0 1499 aa19.53■□□□□ 0.72
SGCA-204ENST00000504073 TEFQ10587 303 aa19.52■□□□□ 0.72
SGCA-204ENST00000504073 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
SGCA-204ENST00000504073 VPS72Q15906 364 aa19.51■□□□□ 0.71
SGCA-204ENST00000504073 SPATA31A1Q5TZJ5 1347 aa19.51■□□□□ 0.71
SGCA-204ENST00000504073 MCM10Q7L590 875 aa19.5■□□□□ 0.71
SGCA-204ENST00000504073 GJD4Q96KN9 370 aaPredicted RBP19.5■□□□□ 0.71
SGCA-204ENST00000504073 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
SGCA-204ENST00000504073 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.5■□□□□ 0.71
SGCA-204ENST00000504073 SPATA31A5Q5VU36 1347 aa19.5■□□□□ 0.71
SGCA-204ENST00000504073 SPATA31A7Q8IWB4 1347 aa19.5■□□□□ 0.71
SGCA-204ENST00000504073 PHKG2P15735 406 aa19.49■□□□□ 0.71
SGCA-204ENST00000504073 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
SGCA-204ENST00000504073 FANCIQ9NVI1 1328 aa19.49■□□□□ 0.71
SGCA-204ENST00000504073 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
SGCA-204ENST00000504073 EXOC5O00471 708 aa19.48■□□□□ 0.71
SGCA-204ENST00000504073 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
SGCA-204ENST00000504073 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
SGCA-204ENST00000504073 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
SGCA-204ENST00000504073 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
SGCA-204ENST00000504073 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
SGCA-204ENST00000504073 RNMTO43148 476 aaKnown RBP19.47■□□□□ 0.71
SGCA-204ENST00000504073 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
SGCA-204ENST00000504073 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
SGCA-204ENST00000504073 ZNF853P0CG23 659 aa19.46■□□□□ 0.71
SGCA-204ENST00000504073 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
SGCA-204ENST00000504073 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
SGCA-204ENST00000504073 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
SGCA-204ENST00000504073 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 DISP2A7MBM2 1401 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 LRRC37A3O60309 1634 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 CHL1O00533 1208 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 MPRIPQ6WCQ1 1025 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
SGCA-204ENST00000504073 GLI3P10071 1580 aa19.44■□□□□ 0.7
SGCA-204ENST00000504073 WNK3Q9BYP7 1800 aa19.44■□□□□ 0.7
SGCA-204ENST00000504073 DDB1Q16531 1140 aa19.44■□□□□ 0.7
SGCA-204ENST00000504073 MBIPQ9NS73 344 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms