RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
SUB1-204ENST00000504016 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
SUB1-204ENST00000504016 MEN1O00255 615 aa9.26□□□□□ -0.93
SUB1-204ENST00000504016 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
SUB1-204ENST00000504016 CC2D2BQ6DHV5 1058 aa9.26□□□□□ -0.93
SUB1-204ENST00000504016 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
SUB1-204ENST00000504016 SNRKQ9NRH2 765 aa9.26□□□□□ -0.93
SUB1-204ENST00000504016 SOCS7O14512 581 aa9.24□□□□□ -0.93
SUB1-204ENST00000504016 RHOQP17081 205 aa9.24□□□□□ -0.93
SUB1-204ENST00000504016 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
SUB1-204ENST00000504016 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
SUB1-204ENST00000504016 ESF1Q9H501 851 aaKnown RBP9.24□□□□□ -0.93
SUB1-204ENST00000504016 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
SUB1-204ENST00000504016 A0A1W2PRU2 124 aa9.23□□□□□ -0.93
SUB1-204ENST00000504016 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
SUB1-204ENST00000504016 GPC1P35052 558 aa9.22□□□□□ -0.93
SUB1-204ENST00000504016 GPR37L1O60883 481 aa9.21□□□□□ -0.94
SUB1-204ENST00000504016 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
SUB1-204ENST00000504016 CYP2U1Q7Z449 544 aa9.21□□□□□ -0.94
SUB1-204ENST00000504016 SCTRP47872 440 aa9.2□□□□□ -0.94
SUB1-204ENST00000504016 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
SUB1-204ENST00000504016 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
SUB1-204ENST00000504016 ADAMTS8Q9UP79 889 aa9.19□□□□□ -0.94
SUB1-204ENST00000504016 POU4F2Q12837 409 aa9.18□□□□□ -0.94
SUB1-204ENST00000504016 ZNF385CQ66K41 422 aaPredicted RBP9.18□□□□□ -0.94
SUB1-204ENST00000504016 RIPOR1Q6ZS17 1223 aa9.18□□□□□ -0.94
SUB1-204ENST00000504016 PRM3Q9NNZ6 103 aa9.18□□□□□ -0.94
SUB1-204ENST00000504016 CEP126Q9P2H0 1117 aa9.18□□□□□ -0.94
SUB1-204ENST00000504016 TRAK2O60296 914 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 SLURP2P0DP57 97 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 CLN3Q13286 438 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 OSBPL3Q9H4L5 887 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
SUB1-204ENST00000504016 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
SUB1-204ENST00000504016 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
SUB1-204ENST00000504016 GAS2L1Q99501 681 aaPredicted RBP9.16□□□□□ -0.94
SUB1-204ENST00000504016 GRIP2Q9C0E4 1043 aa9.16□□□□□ -0.94
SUB1-204ENST00000504016 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
SUB1-204ENST00000504016 DYRK1BQ9Y463 629 aa9.16□□□□□ -0.94
SUB1-204ENST00000504016 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
SUB1-204ENST00000504016 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
SUB1-204ENST00000504016 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
SUB1-204ENST00000504016 TRIM22Q8IYM9 498 aa9.15□□□□□ -0.94
SUB1-204ENST00000504016 RAB6BQ9NRW1 208 aa9.15□□□□□ -0.94
SUB1-204ENST00000504016 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
SUB1-204ENST00000504016 NBPF15Q8N660 670 aa9.14□□□□□ -0.95
SUB1-204ENST00000504016 ZNF837Q96EG3 531 aaPredicted RBP9.14□□□□□ -0.95
SUB1-204ENST00000504016 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
SUB1-204ENST00000504016 H7C1W4 665 aa9.13□□□□□ -0.95
SUB1-204ENST00000504016 GNRH1P01148 92 aa9.13□□□□□ -0.95
SUB1-204ENST00000504016 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
SUB1-204ENST00000504016 SRSF11Q05519 484 aaKnown RBP9.13□□□□□ -0.95
SUB1-204ENST00000504016 GAS6Q14393 721 aa9.13□□□□□ -0.95
SUB1-204ENST00000504016 DBN1Q16643 649 aa9.13□□□□□ -0.95
SUB1-204ENST00000504016 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
SUB1-204ENST00000504016 SPATA31C2B4DYI2 1134 aa9.12□□□□□ -0.95
SUB1-204ENST00000504016 RNF225M0QZC1 329 aaPredicted RBP9.12□□□□□ -0.95
SUB1-204ENST00000504016 GPR25O00155 361 aa9.12□□□□□ -0.95
SUB1-204ENST00000504016 TAS1R3Q7RTX0 852 aa9.12□□□□□ -0.95
SUB1-204ENST00000504016 CNKSR1Q969H4 720 aa9.12□□□□□ -0.95
SUB1-204ENST00000504016 TIMMDC1Q9NPL8 285 aa9.12□□□□□ -0.95
SUB1-204ENST00000504016 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
SUB1-204ENST00000504016 ARHGEF15O94989 841 aa9.11□□□□□ -0.95
SUB1-204ENST00000504016 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
SUB1-204ENST00000504016 ESYT1Q9BSJ8 1104 aa9.11□□□□□ -0.95
SUB1-204ENST00000504016 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
SUB1-204ENST00000504016 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 RASSF7Q02833 373 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 CENPCQ03188 943 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 LYPD4Q6UWN0 246 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
SUB1-204ENST00000504016 GTPBP3Q969Y2 492 aaKnown RBP9.1□□□□□ -0.95
SUB1-204ENST00000504016 GDF11O95390 407 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 IL2RAP01589 272 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 GTF2E1P29083 439 aaPredicted RBP9.09□□□□□ -0.95
SUB1-204ENST00000504016 GSK3AP49840 483 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 IRF5Q13568 498 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 MBIPQ9NS73 344 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
SUB1-204ENST00000504016 F11P03951 625 aa9.08□□□□□ -0.96
SUB1-204ENST00000504016 USP4Q13107 963 aa9.08□□□□□ -0.96
SUB1-204ENST00000504016 TSGA10IPQ3SY00 556 aa9.08□□□□□ -0.96
SUB1-204ENST00000504016 RNF135Q8IUD6 432 aa9.08□□□□□ -0.96
SUB1-204ENST00000504016 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
SUB1-204ENST00000504016 ZSCAN10Q96SZ4 725 aaPredicted RBP9.08□□□□□ -0.96
SUB1-204ENST00000504016 CELA2BP08218 269 aaPredicted RBP9.07□□□□□ -0.96
SUB1-204ENST00000504016 PHKA2P46019 1235 aa9.07□□□□□ -0.96
SUB1-204ENST00000504016 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
SUB1-204ENST00000504016 XAGE2Q96GT9 111 aa9.07□□□□□ -0.96
SUB1-204ENST00000504016 NUCKS1Q9H1E3 243 aaKnown RBP9.07□□□□□ -0.96
SUB1-204ENST00000504016 GDPD2Q9HCC8 539 aa9.07□□□□□ -0.96
SUB1-204ENST00000504016 IGF1RP08069 1367 aa9.07□□□□□ -0.96
SUB1-204ENST00000504016 ABL2P42684 1182 aa9.06□□□□□ -0.96
SUB1-204ENST00000504016 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
SUB1-204ENST00000504016 TMEM214Q6NUQ4 689 aaKnown RBP9.06□□□□□ -0.96
SUB1-204ENST00000504016 PHTF2Q8N3S3 785 aa9.06□□□□□ -0.96
SUB1-204ENST00000504016 ENAMQ9NRM1 1142 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms