RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NBPF4Q96M43 638 aa30.45■■■□□ 2.47
LSM6-203ENST00000503982 CGNL1Q0VF96 1302 aa30.45■■■□□ 2.46
LSM6-203ENST00000503982 MEGF6O75095 1541 aa30.43■■■□□ 2.46
LSM6-203ENST00000503982 MAP2P11137 1827 aaKnown RBP30.43■■■□□ 2.46
LSM6-203ENST00000503982 DOT1LQ8TEK3 1739 aa30.43■■■□□ 2.46
LSM6-203ENST00000503982 INSRP06213 1382 aa30.42■■■□□ 2.46
LSM6-203ENST00000503982 TATP17735 454 aaPredicted RBP30.42■■■□□ 2.46
LSM6-203ENST00000503982 EMILIN1Q9Y6C2 1016 aa30.41■■■□□ 2.46
LSM6-203ENST00000503982 SHANK3Q9BYB0 1731 aa30.41■■■□□ 2.46
LSM6-203ENST00000503982 KIF24Q5T7B8 1368 aa30.39■■■□□ 2.45
LSM6-203ENST00000503982 SLC15A2Q16348 729 aa30.38■■■□□ 2.45
LSM6-203ENST00000503982 CASZ1Q86V15 1759 aa30.38■■■□□ 2.45
LSM6-203ENST00000503982 ANKRD26Q9UPS8 1709 aa30.36■■■□□ 2.45
LSM6-203ENST00000503982 TNNT2P45379 298 aaPredicted RBP30.36■■■□□ 2.45
LSM6-203ENST00000503982 ZBTB7AO95365 584 aa30.35■■■□□ 2.45
LSM6-203ENST00000503982 PRIM1P49642 420 aaKnown RBP30.35■■■□□ 2.45
LSM6-203ENST00000503982 PDGFDQ9GZP0 370 aaPredicted RBP30.33■■■□□ 2.45
LSM6-203ENST00000503982 PANK3Q9H999 370 aa30.32■■■□□ 2.44
LSM6-203ENST00000503982 ATF5Q9Y2D1 282 aaPredicted RBP30.31■■■□□ 2.44
LSM6-203ENST00000503982 PCDH11XQ9BZA7 1347 aa30.29■■■□□ 2.44
LSM6-203ENST00000503982 PCDH11YQ9BZA8 1340 aa30.29■■■□□ 2.44
LSM6-203ENST00000503982 PAPPAQ13219 1627 aa30.27■■■□□ 2.44
LSM6-203ENST00000503982 SLC27A3Q5K4L6 730 aa30.26■■■□□ 2.43
LSM6-203ENST00000503982 LRRC4BQ9NT99 713 aa30.26■■■□□ 2.43
LSM6-203ENST00000503982 WASHC2AQ641Q2 1341 aa30.25■■■□□ 2.43
LSM6-203ENST00000503982 DCAF8L1A6NGE4 600 aa30.25■■■□□ 2.43
LSM6-203ENST00000503982 POLKQ9UBT6 870 aa30.25■■■□□ 2.43
LSM6-203ENST00000503982 LY75O60449 1722 aa30.23■■■□□ 2.43
LSM6-203ENST00000503982 KCNQ4P56696 695 aa30.23■■■□□ 2.43
LSM6-203ENST00000503982 ZNF827Q17R98 1081 aa30.23■■■□□ 2.43
LSM6-203ENST00000503982 NSD2O96028 1365 aa30.21■■■□□ 2.43
LSM6-203ENST00000503982 EYA1Q99502 592 aa30.21■■■□□ 2.43
LSM6-203ENST00000503982 MTFR1LQ9H019 292 aa30.21■■■□□ 2.43
LSM6-203ENST00000503982 CCNL1Q9UK58 526 aaPredicted RBP30.21■■■□□ 2.43
LSM6-203ENST00000503982 PKD1L3Q7Z443 1732 aa30.21■■■□□ 2.43
LSM6-203ENST00000503982 SPG7Q9UQ90 795 aa30.2■■■□□ 2.43
LSM6-203ENST00000503982 MORC1Q86VD1 984 aa30.19■■■□□ 2.42
LSM6-203ENST00000503982 TFCP2L1Q9NZI6 479 aa30.19■■■□□ 2.42
LSM6-203ENST00000503982 KNSTRNQ9Y448 316 aa30.19■■■□□ 2.42
LSM6-203ENST00000503982 MPRIPQ6WCQ1 1025 aa30.18■■■□□ 2.42
LSM6-203ENST00000503982 ITGB4P16144 1822 aa30.17■■■□□ 2.42
LSM6-203ENST00000503982 CYP27B1O15528 508 aa30.17■■■□□ 2.42
LSM6-203ENST00000503982 EIF4A2Q14240 407 aaKnown RBP30.16■■■□□ 2.42
LSM6-203ENST00000503982 TUBGCP6Q96RT7 1819 aa30.16■■■□□ 2.42
LSM6-203ENST00000503982 QSER1Q2KHR3 1735 aa30.16■■■□□ 2.42
LSM6-203ENST00000503982 AKT1S1Q96B36 256 aa30.15■■■□□ 2.42
LSM6-203ENST00000503982 PTGER2P43116 358 aa30.14■■■□□ 2.42
LSM6-203ENST00000503982 TOGARAM1Q9Y4F4 1720 aa30.13■■■□□ 2.41
LSM6-203ENST00000503982 MSH5O43196 834 aa30.13■■■□□ 2.41
LSM6-203ENST00000503982 NCAPD2Q15021 1401 aa30.13■■■□□ 2.41
LSM6-203ENST00000503982 KIF7Q2M1P5 1343 aa30.09■■■□□ 2.41
LSM6-203ENST00000503982 PALLDQ8WX93 1383 aa30.09■■■□□ 2.41
LSM6-203ENST00000503982 C5P01031 1676 aa30.08■■■□□ 2.41
LSM6-203ENST00000503982 PNPLA7Q6ZV29 1317 aa30.08■■■□□ 2.41
LSM6-203ENST00000503982 IFNL2Q8IZJ0 200 aa30.08■■■□□ 2.41
LSM6-203ENST00000503982 ARXQ96QS3 562 aa30.08■■■□□ 2.41
LSM6-203ENST00000503982 FHDC1Q9C0D6 1143 aaPredicted RBP30.08■■■□□ 2.41
LSM6-203ENST00000503982 POLD1P28340 1107 aa30.07■■■□□ 2.4
LSM6-203ENST00000503982 KLHL34Q8N239 644 aa30.07■■■□□ 2.4
LSM6-203ENST00000503982 SLC16A10Q8TF71 515 aa30.06■■■□□ 2.4
LSM6-203ENST00000503982 SMARCC1Q92922 1105 aaPredicted RBP30.06■■■□□ 2.4
LSM6-203ENST00000503982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.06■■■□□ 2.4
LSM6-203ENST00000503982 TAF1LQ8IZX4 1826 aa30.05■■■□□ 2.4
LSM6-203ENST00000503982 HMGB2P26583 209 aaKnown RBP30.04■■■□□ 2.4
LSM6-203ENST00000503982 TMOD3Q9NYL9 352 aa30.04■■■□□ 2.4
LSM6-203ENST00000503982 IGSF1Q8N6C5 1336 aa30.03■■■□□ 2.4
LSM6-203ENST00000503982 PHKG2P15735 406 aa30.03■■■□□ 2.4
LSM6-203ENST00000503982 NKX1-1Q15270 411 aaPredicted RBP30.03■■■□□ 2.4
LSM6-203ENST00000503982 PIGBQ92521 554 aa30.03■■■□□ 2.4
LSM6-203ENST00000503982 SGIP1Q9BQI5 828 aa30.03■■■□□ 2.4
LSM6-203ENST00000503982 SYT17Q9BSW7 474 aa30.01■■■□□ 2.39
LSM6-203ENST00000503982 YY1P25490 414 aa30■■■□□ 2.39
LSM6-203ENST00000503982 CNGB1Q14028 1251 aaPredicted RBP30■■■□□ 2.39
LSM6-203ENST00000503982 PLEKHO1Q53GL0 409 aaPredicted RBP30■■■□□ 2.39
LSM6-203ENST00000503982 AK7Q96M32 723 aa29.98■■■□□ 2.39
LSM6-203ENST00000503982 AMER1Q5JTC6 1135 aaPredicted RBP29.96■■■□□ 2.39
LSM6-203ENST00000503982 CC2D1BQ5T0F9 858 aaKnown RBP29.96■■■□□ 2.39
LSM6-203ENST00000503982 ZNF530Q6P9A1 599 aaPredicted RBP29.96■■■□□ 2.39
LSM6-203ENST00000503982 COL23A1Q86Y22 540 aaPredicted RBP29.96■■■□□ 2.39
LSM6-203ENST00000503982 C4BP0C0L5 1744 aa29.96■■■□□ 2.39
LSM6-203ENST00000503982 HSP90AB1P08238 724 aaKnown RBP29.94■■■□□ 2.38
LSM6-203ENST00000503982 SULT6B1Q6IMI4 303 aa29.94■■■□□ 2.38
LSM6-203ENST00000503982 AMOTQ4VCS5 1084 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 C1orf141Q5JVX7 400 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 MSL1Q68DK7 614 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 AEBP1Q8IUX7 1158 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 FLAD1Q8NFF5 587 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 ASAP1Q9ULH1 1129 aa29.93■■■□□ 2.38
LSM6-203ENST00000503982 PLEKHG2Q9H7P9 1386 aa29.92■■■□□ 2.38
LSM6-203ENST00000503982 LOC102724428A0A0B4J2F2 783 aa29.92■■■□□ 2.38
LSM6-203ENST00000503982 SIK1P57059 783 aa29.92■■■□□ 2.38
LSM6-203ENST00000503982 COL24A1Q17RW2 1714 aa29.92■■■□□ 2.38
LSM6-203ENST00000503982 PHF14O94880 888 aa29.91■■■□□ 2.38
LSM6-203ENST00000503982 ATP6V1AP38606 617 aa29.89■■■□□ 2.38
LSM6-203ENST00000503982 MTHFSP49914 203 aa29.89■■■□□ 2.38
LSM6-203ENST00000503982 PELP1Q8IZL8 1130 aaKnown RBP29.89■■■□□ 2.38
LSM6-203ENST00000503982 DCAF5Q96JK2 942 aa29.89■■■□□ 2.38
LSM6-203ENST00000503982 IL13P35225 146 aa29.88■■■□□ 2.37
LSM6-203ENST00000503982 UBR3Q6ZT12 1888 aa29.87■■■□□ 2.37
LSM6-203ENST00000503982 RBM42Q9BTD8 480 aaKnown RBP29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms