RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 IVNS1ABPQ9Y6Y0 642 aa8.22□□□□□ -1.09
SCLT1-206ENST00000503565 ATP9BO43861 1147 aa8.21□□□□□ -1.1
SCLT1-206ENST00000503565 ZNF787Q6DD87 383 aa8.21□□□□□ -1.1
SCLT1-206ENST00000503565 ERVH48-1M5A8F1 160 aa8.2□□□□□ -1.1
SCLT1-206ENST00000503565 PIK3CDO00329 1044 aa8.2□□□□□ -1.1
SCLT1-206ENST00000503565 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCLT1-206ENST00000503565 CBLBQ13191 982 aa8.2□□□□□ -1.1
SCLT1-206ENST00000503565 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
SCLT1-206ENST00000503565 LILRA1O75019 489 aa8.19□□□□□ -1.1
SCLT1-206ENST00000503565 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
SCLT1-206ENST00000503565 RAB15P59190 212 aa8.19□□□□□ -1.1
SCLT1-206ENST00000503565 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
SCLT1-206ENST00000503565 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
SCLT1-206ENST00000503565 RBM25P49756 843 aaKnown RBP8.18□□□□□ -1.1
SCLT1-206ENST00000503565 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
SCLT1-206ENST00000503565 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
SCLT1-206ENST00000503565 TSGA10IPQ3SY00 556 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
SCLT1-206ENST00000503565 Q6ZVU0 165 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCLT1-206ENST00000503565 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
SCLT1-206ENST00000503565 ZNF784Q8NCA9 323 aaPredicted RBP8.17□□□□□ -1.1
SCLT1-206ENST00000503565 ZFP42Q96MM3 310 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 CEP126Q9P2H0 1117 aa8.17□□□□□ -1.1
SCLT1-206ENST00000503565 ELOAQ14241 798 aaKnown RBP8.16□□□□□ -1.1
SCLT1-206ENST00000503565 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
SCLT1-206ENST00000503565 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
SCLT1-206ENST00000503565 TMEM164Q5U3C3 297 aa8.15□□□□□ -1.1
SCLT1-206ENST00000503565 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.1
SCLT1-206ENST00000503565 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
SCLT1-206ENST00000503565 PURBQ96QR8 312 aaKnown RBP8.15□□□□□ -1.1
SCLT1-206ENST00000503565 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
SCLT1-206ENST00000503565 SCTRP47872 440 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
SCLT1-206ENST00000503565 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
SCLT1-206ENST00000503565 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 NFATC2IPQ8NCF5 419 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 AGBL1Q96MI9 1066 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
SCLT1-206ENST00000503565 GNEQ9Y223 722 aaKnown RBP8.14□□□□□ -1.11
SCLT1-206ENST00000503565 PHLDB3Q6NSJ2 640 aa8.13□□□□□ -1.11
SCLT1-206ENST00000503565 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
SCLT1-206ENST00000503565 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-206ENST00000503565 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
SCLT1-206ENST00000503565 USP17L5A8MUK1 530 aa8.12□□□□□ -1.11
SCLT1-206ENST00000503565 PLEKHM2Q8IWE5 1019 aa8.12□□□□□ -1.11
SCLT1-206ENST00000503565 CYLDQ9NQC7 956 aa8.12□□□□□ -1.11
SCLT1-206ENST00000503565 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
SCLT1-206ENST00000503565 SKIP12755 728 aa8.11□□□□□ -1.11
SCLT1-206ENST00000503565 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
SCLT1-206ENST00000503565 DEPDC4Q8N2C3 294 aa8.11□□□□□ -1.11
SCLT1-206ENST00000503565 SLAIN2Q9P270 581 aa8.11□□□□□ -1.11
SCLT1-206ENST00000503565 SOBPA7XYQ1 873 aa8.1□□□□□ -1.11
SCLT1-206ENST00000503565 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
SCLT1-206ENST00000503565 TXNDC2Q86VQ3 553 aa8.1□□□□□ -1.11
SCLT1-206ENST00000503565 ZNF775Q96BV0 537 aaPredicted RBP8.1□□□□□ -1.11
SCLT1-206ENST00000503565 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
SCLT1-206ENST00000503565 CRTC2Q53ET0 693 aaPredicted RBP8.09□□□□□ -1.11
SCLT1-206ENST00000503565 B4GALNT3Q6L9W6 998 aa8.09□□□□□ -1.11
SCLT1-206ENST00000503565 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
SCLT1-206ENST00000503565 PCDHB11Q9Y5F2 797 aa8.09□□□□□ -1.11
SCLT1-206ENST00000503565 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
SCLT1-206ENST00000503565 FAM196BA6NMK8 535 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L21D6R901 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 SPINT1O43278 529 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 ADH1AP07327 375 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 BMP2P12643 396 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 RELBQ01201 579 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 SCARF1Q14162 830 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 KIFC2Q96AC6 838 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 OSBPL3Q9H4L5 887 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 AMOTL2Q9Y2J4 779 aa8.08□□□□□ -1.12
SCLT1-206ENST00000503565 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
SCLT1-206ENST00000503565 PTK7Q13308 1070 aa8.07□□□□□ -1.12
SCLT1-206ENST00000503565 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
SCLT1-206ENST00000503565 ZNF395Q9H8N7 513 aaPredicted RBP8.07□□□□□ -1.12
SCLT1-206ENST00000503565 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
SCLT1-206ENST00000503565 SSFA2P28290 1259 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 PTGIRP43119 386 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 CTSOP43234 321 aaPredicted RBP8.06□□□□□ -1.12
SCLT1-206ENST00000503565 NCOA4Q13772 614 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms