RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ERBB3P21860 1342 aa16.85■□□□□ 0.29
TNPO1-202ENST00000503084 KCNH5Q8NCM2 988 aa16.84■□□□□ 0.29
TNPO1-202ENST00000503084 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
TNPO1-202ENST00000503084 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
TNPO1-202ENST00000503084 C5P01031 1676 aa16.83■□□□□ 0.28
TNPO1-202ENST00000503084 FSTL1Q12841 308 aa16.83■□□□□ 0.28
TNPO1-202ENST00000503084 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
TNPO1-202ENST00000503084 ANKRD36BQ8N2N9 1353 aa16.82■□□□□ 0.28
TNPO1-202ENST00000503084 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
TNPO1-202ENST00000503084 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
TNPO1-202ENST00000503084 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
TNPO1-202ENST00000503084 CABP1Q9NZU7 370 aa16.81■□□□□ 0.28
TNPO1-202ENST00000503084 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
TNPO1-202ENST00000503084 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
TNPO1-202ENST00000503084 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
TNPO1-202ENST00000503084 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
TNPO1-202ENST00000503084 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.28
TNPO1-202ENST00000503084 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
TNPO1-202ENST00000503084 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
TNPO1-202ENST00000503084 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
TNPO1-202ENST00000503084 LTN1O94822 1766 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 USP47Q96K76 1375 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
TNPO1-202ENST00000503084 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
TNPO1-202ENST00000503084 TNRC6CQ9HCJ0 1690 aaKnown RBP16.73■□□□□ 0.27
TNPO1-202ENST00000503084 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
TNPO1-202ENST00000503084 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
TNPO1-202ENST00000503084 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
TNPO1-202ENST00000503084 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
TNPO1-202ENST00000503084 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
TNPO1-202ENST00000503084 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 KIF13BQ9NQT8 1826 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
TNPO1-202ENST00000503084 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
TNPO1-202ENST00000503084 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
TNPO1-202ENST00000503084 PHF14O94880 888 aa16.69■□□□□ 0.26
TNPO1-202ENST00000503084 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
TNPO1-202ENST00000503084 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
TNPO1-202ENST00000503084 AK7Q96M32 723 aa16.67■□□□□ 0.26
TNPO1-202ENST00000503084 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
TNPO1-202ENST00000503084 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
TNPO1-202ENST00000503084 MEGF6O75095 1541 aa16.66■□□□□ 0.26
TNPO1-202ENST00000503084 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
TNPO1-202ENST00000503084 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
TNPO1-202ENST00000503084 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
TNPO1-202ENST00000503084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
TNPO1-202ENST00000503084 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
TNPO1-202ENST00000503084 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
TNPO1-202ENST00000503084 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
TNPO1-202ENST00000503084 FOXN1O15353 648 aa16.63■□□□□ 0.25
TNPO1-202ENST00000503084 FCHSD2O94868 740 aa16.63■□□□□ 0.25
TNPO1-202ENST00000503084 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
TNPO1-202ENST00000503084 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
TNPO1-202ENST00000503084 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
TNPO1-202ENST00000503084 MMP10P09238 476 aa16.62■□□□□ 0.25
TNPO1-202ENST00000503084 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
TNPO1-202ENST00000503084 TGFB2P61812 414 aa16.61■□□□□ 0.25
TNPO1-202ENST00000503084 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
TNPO1-202ENST00000503084 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
TNPO1-202ENST00000503084 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
TNPO1-202ENST00000503084 DPEP1P16444 411 aa16.6■□□□□ 0.25
TNPO1-202ENST00000503084 SSFA2P28290 1259 aa16.6■□□□□ 0.25
TNPO1-202ENST00000503084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNPO1-202ENST00000503084 NME9Q86XW9 330 aa16.59■□□□□ 0.25
TNPO1-202ENST00000503084 HMGB2P26583 209 aaKnown RBP16.58■□□□□ 0.24
TNPO1-202ENST00000503084 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
TNPO1-202ENST00000503084 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
TNPO1-202ENST00000503084 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
TNPO1-202ENST00000503084 ABHD8Q96I13 439 aa16.56■□□□□ 0.24
TNPO1-202ENST00000503084 SBNO2Q9Y2G9 1366 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 SBF1O95248 1867 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 MAP2P11137 1827 aaKnown RBP16.55■□□□□ 0.24
TNPO1-202ENST00000503084 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 IP6K1Q92551 441 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
TNPO1-202ENST00000503084 GNPATO15228 680 aa16.54■□□□□ 0.24
TNPO1-202ENST00000503084 MLLT1Q03111 559 aaPredicted RBP16.54■□□□□ 0.24
TNPO1-202ENST00000503084 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
TNPO1-202ENST00000503084 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
TNPO1-202ENST00000503084 ITGB4P16144 1822 aa16.52■□□□□ 0.24
TNPO1-202ENST00000503084 KCNA3P22001 575 aa16.52■□□□□ 0.24
TNPO1-202ENST00000503084 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.23
TNPO1-202ENST00000503084 VEGFAP15692 232 aaPredicted RBP16.51■□□□□ 0.23
TNPO1-202ENST00000503084 SMARCC1Q92922 1105 aaPredicted RBP16.51■□□□□ 0.23
TNPO1-202ENST00000503084 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
TNPO1-202ENST00000503084 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
TNPO1-202ENST00000503084 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
TNPO1-202ENST00000503084 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
TNPO1-202ENST00000503084 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
TNPO1-202ENST00000503084 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
TNPO1-202ENST00000503084 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
TNPO1-202ENST00000503084 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms