RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 PROM2Q8N271 834 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 CHIC2Q9UKJ5 165 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 ARHGAP31Q2M1Z3 1444 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 ANKRD30AQ9BXX3 1397 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 LIG1P18858 919 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 TIE1P35590 1138 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 KCNJ4P48050 445 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
CLCN3-203ENST00000502998 NME8Q8N427 588 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 CALCOCO1Q9P1Z2 691 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 ANAPC4Q9UJX5 808 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 KNSTRNQ9Y448 316 aa8.03□□□□□ -1.12
CLCN3-203ENST00000502998 HMGB1P1B2RPK0 211 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-203ENST00000502998 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
CLCN3-203ENST00000502998 CTAGE5O15320 804 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 ZRANB2O95218 330 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLCN3-203ENST00000502998 SCP2P22307 547 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 RGL3Q3MIN7 710 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 CT47A1Q5JQC4 288 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-203ENST00000502998 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
CLCN3-203ENST00000502998 MTA3Q9BTC8 594 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 FAM13BQ9NYF5 915 aa8.02□□□□□ -1.13
CLCN3-203ENST00000502998 ADGRL2O95490 1459 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 KANK1Q14678 1352 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 KLHL33A6NCF5 533 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 GOLGA6CA6NDK9 693 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 GOLGA6BA6NDN3 693 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 IPO8O15397 1037 aaKnown RBP8.01□□□□□ -1.13
CLCN3-203ENST00000502998 GOLGA6DP0CG33 693 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 LTKP29376 864 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 TDO2P48775 406 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 CREBRFQ8IUR6 639 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 SUDS3Q9H7L9 328 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-203ENST00000502998 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 MED4Q9NPJ6 270 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 GOLGA6AQ9NYA3 693 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 CEP126Q9P2H0 1117 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 LMTK2Q8IWU2 1503 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 RAD50Q92878 1312 aa8.01□□□□□ -1.13
CLCN3-203ENST00000502998 SCAF11Q99590 1463 aaKnown RBP8□□□□□ -1.13
CLCN3-203ENST00000502998 ARHGAP23Q9P227 1491 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 SLIT1O75093 1534 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 MAP3K13O43283 966 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 COQ9O75208 318 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 GTF2A1P52655 376 aaPredicted RBP8□□□□□ -1.13
CLCN3-203ENST00000502998 GABPB1Q06547 395 aaPredicted RBP8□□□□□ -1.13
CLCN3-203ENST00000502998 SWT1Q5T5J6 900 aaKnown RBP8□□□□□ -1.13
CLCN3-203ENST00000502998 SNRNP27Q8WVK2 155 aaKnown RBP8□□□□□ -1.13
CLCN3-203ENST00000502998 SIRT1Q96EB6 747 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 STK26Q9P289 416 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 SYNMO15061 1565 aa8□□□□□ -1.13
CLCN3-203ENST00000502998 PPP1R12AO14974 1030 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-203ENST00000502998 FAM135BQ49AJ0 1406 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 TXNDC2Q86VQ3 553 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 CHMP4CQ96CF2 233 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
CLCN3-203ENST00000502998 BORCS6Q96GS4 357 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 SLC26A8Q96RN1 970 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 SMC3Q9UQE7 1217 aa7.99□□□□□ -1.13
CLCN3-203ENST00000502998 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 ANKRD50Q9ULJ7 1429 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 FSD2A1L4K1 749 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 IPO7O95373 1038 aaKnown RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 BRD1O95696 1058 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 TRDNQ13061 729 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 IDI1Q13907 227 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 CDC37Q16543 378 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 GORABQ5T7V8 394 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 RBM26Q5T8P6 1007 aaKnown RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 TMCO4Q5TGY1 634 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 EP400NLQ6ZTU2 488 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 CXorf38Q8TB03 319 aa7.98□□□□□ -1.13
CLCN3-203ENST00000502998 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
CLCN3-203ENST00000502998 TMEM2Q9UHN6 1383 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 NOS1P29475 1434 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 DHX16O60231 1041 aaKnown RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 MS4A1P11836 297 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 SSFA2P28290 1259 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 TNNT3P45378 269 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 MRE11P49959 708 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 ZC3H12AQ5D1E8 599 aaKnown RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 ZNF280DQ6N043 979 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 JMYQ8N9B5 988 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 UPF1Q92900 1129 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 COLQQ9Y215 455 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-203ENST00000502998 PAXBP1Q9Y5B6 917 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 EID1Q9Y6B2 187 aa7.97□□□□□ -1.13
CLCN3-203ENST00000502998 TTLL13PA6NNM8 815 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms