RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
DDR1-247ENST00000502955 POLD1P28340 1107 aa19.38■□□□□ 0.69
DDR1-247ENST00000502955 LTV1Q96GA3 475 aaPredicted RBP19.38■□□□□ 0.69
DDR1-247ENST00000502955 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
DDR1-247ENST00000502955 MEGF6O75095 1541 aa19.37■□□□□ 0.69
DDR1-247ENST00000502955 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
DDR1-247ENST00000502955 TFCP2L1Q9NZI6 479 aa19.37■□□□□ 0.69
DDR1-247ENST00000502955 AMPHP49418 695 aa19.36■□□□□ 0.69
DDR1-247ENST00000502955 ZCRB1Q8TBF4 217 aaKnown RBP19.36■□□□□ 0.69
DDR1-247ENST00000502955 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
DDR1-247ENST00000502955 CGNL1Q0VF96 1302 aa19.35■□□□□ 0.69
DDR1-247ENST00000502955 ST20-MTHFSA0A0A6YYL1 179 aa19.35■□□□□ 0.69
DDR1-247ENST00000502955 GPR162Q16538 588 aa19.35■□□□□ 0.69
DDR1-247ENST00000502955 KCNQ4P56696 695 aa19.33■□□□□ 0.68
DDR1-247ENST00000502955 C1QTNF8P60827 252 aa19.33■□□□□ 0.68
DDR1-247ENST00000502955 FBLN1P23142 703 aa19.32■□□□□ 0.68
DDR1-247ENST00000502955 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
DDR1-247ENST00000502955 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
DDR1-247ENST00000502955 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
DDR1-247ENST00000502955 USP47Q96K76 1375 aa19.31■□□□□ 0.68
DDR1-247ENST00000502955 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
DDR1-247ENST00000502955 FYB1O15117 783 aa19.29■□□□□ 0.68
DDR1-247ENST00000502955 NLGN2Q8NFZ4 835 aa19.29■□□□□ 0.68
DDR1-247ENST00000502955 C5P01031 1676 aa19.28■□□□□ 0.68
DDR1-247ENST00000502955 HMGB2P26583 209 aaKnown RBP19.28■□□□□ 0.68
DDR1-247ENST00000502955 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
DDR1-247ENST00000502955 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
DDR1-247ENST00000502955 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
DDR1-247ENST00000502955 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
DDR1-247ENST00000502955 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
DDR1-247ENST00000502955 RAPGEF4Q8WZA2 1011 aa19.27■□□□□ 0.68
DDR1-247ENST00000502955 INSRP06213 1382 aa19.27■□□□□ 0.68
DDR1-247ENST00000502955 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 GRIN3BO60391 1043 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 TATP17735 454 aaPredicted RBP19.25■□□□□ 0.67
DDR1-247ENST00000502955 TMF1P82094 1093 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
DDR1-247ENST00000502955 FLT4P35916 1363 aa19.24■□□□□ 0.67
DDR1-247ENST00000502955 KIF20BQ96Q89 1820 aa19.24■□□□□ 0.67
DDR1-247ENST00000502955 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
DDR1-247ENST00000502955 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
DDR1-247ENST00000502955 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
DDR1-247ENST00000502955 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
DDR1-247ENST00000502955 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
DDR1-247ENST00000502955 MSH5O43196 834 aa19.22■□□□□ 0.67
DDR1-247ENST00000502955 HSP90AB2PQ58FF8 381 aa19.22■□□□□ 0.67
DDR1-247ENST00000502955 CEP350Q5VT06 3117 aa19.22■□□□□ 0.67
DDR1-247ENST00000502955 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
DDR1-247ENST00000502955 PKD1L3Q7Z443 1732 aa19.21■□□□□ 0.67
DDR1-247ENST00000502955 CD2APQ9Y5K6 639 aa19.21■□□□□ 0.67
DDR1-247ENST00000502955 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
DDR1-247ENST00000502955 NCAPD2Q15021 1401 aa19.2■□□□□ 0.66
DDR1-247ENST00000502955 ITGB4P16144 1822 aa19.2■□□□□ 0.66
DDR1-247ENST00000502955 C4BP0C0L5 1744 aa19.2■□□□□ 0.66
DDR1-247ENST00000502955 CYP27B1O15528 508 aa19.19■□□□□ 0.66
DDR1-247ENST00000502955 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
DDR1-247ENST00000502955 MPRIPQ6WCQ1 1025 aa19.18■□□□□ 0.66
DDR1-247ENST00000502955 SMARCC1Q92922 1105 aaPredicted RBP19.18■□□□□ 0.66
DDR1-247ENST00000502955 ANKRD26Q9UPS8 1709 aa19.17■□□□□ 0.66
DDR1-247ENST00000502955 MSL1Q68DK7 614 aa19.17■□□□□ 0.66
DDR1-247ENST00000502955 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
DDR1-247ENST00000502955 NKX1-1Q15270 411 aaPredicted RBP19.16■□□□□ 0.66
DDR1-247ENST00000502955 NSD3Q9BZ95 1437 aa19.16■□□□□ 0.66
DDR1-247ENST00000502955 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
DDR1-247ENST00000502955 CARD14Q9BXL6 1004 aa19.14■□□□□ 0.65
DDR1-247ENST00000502955 PIGBQ92521 554 aa19.13■□□□□ 0.65
DDR1-247ENST00000502955 AK7Q96M32 723 aa19.13■□□□□ 0.65
DDR1-247ENST00000502955 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
DDR1-247ENST00000502955 ATP10DQ9P241 1426 aa19.12■□□□□ 0.65
DDR1-247ENST00000502955 ADCY9O60503 1353 aa19.12■□□□□ 0.65
DDR1-247ENST00000502955 AMIGO3Q86WK7 504 aa19.12■□□□□ 0.65
DDR1-247ENST00000502955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDR1-247ENST00000502955 WASHC2AQ641Q2 1341 aa19.11■□□□□ 0.65
DDR1-247ENST00000502955 SSFA2P28290 1259 aa19.11■□□□□ 0.65
DDR1-247ENST00000502955 SPG7Q9UQ90 795 aa19.11■□□□□ 0.65
DDR1-247ENST00000502955 PLEKHG2Q9H7P9 1386 aa19.09■□□□□ 0.65
DDR1-247ENST00000502955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.09■□□□□ 0.65
DDR1-247ENST00000502955 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.64
DDR1-247ENST00000502955 SIK1P57059 783 aa19.08■□□□□ 0.64
DDR1-247ENST00000502955 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
DDR1-247ENST00000502955 IGSF1Q8N6C5 1336 aa19.06■□□□□ 0.64
DDR1-247ENST00000502955 PHF14O94880 888 aa19.06■□□□□ 0.64
DDR1-247ENST00000502955 EYA1Q99502 592 aa19.06■□□□□ 0.64
DDR1-247ENST00000502955 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
DDR1-247ENST00000502955 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
DDR1-247ENST00000502955 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
DDR1-247ENST00000502955 PHKG2P15735 406 aa19.04■□□□□ 0.64
DDR1-247ENST00000502955 IFNL2Q8IZJ0 200 aa19.04■□□□□ 0.64
DDR1-247ENST00000502955 ASAP1Q9ULH1 1129 aa19.04■□□□□ 0.64
DDR1-247ENST00000502955 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
DDR1-247ENST00000502955 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
DDR1-247ENST00000502955 KIF13BQ9NQT8 1826 aa19.03■□□□□ 0.64
DDR1-247ENST00000502955 ITPK1Q13572 414 aa19.03■□□□□ 0.64
DDR1-247ENST00000502955 SMIM5Q71RC9 77 aa19.03■□□□□ 0.64
DDR1-247ENST00000502955 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
DDR1-247ENST00000502955 ATP6V1AP38606 617 aa19.02■□□□□ 0.64
DDR1-247ENST00000502955 GNPATO15228 680 aa19.01■□□□□ 0.63
DDR1-247ENST00000502955 ATG3Q9NT62 314 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms