RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TMF1P82094 1093 aa8.58□□□□□ -1.04
LSM3P4-201ENST00000502948 FHDC1Q9C0D6 1143 aaPredicted RBP8.58□□□□□ -1.04
LSM3P4-201ENST00000502948 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
LSM3P4-201ENST00000502948 TAF1LQ8IZX4 1826 aa8.58□□□□□ -1.04
LSM3P4-201ENST00000502948 INSRP06213 1382 aa8.58□□□□□ -1.04
LSM3P4-201ENST00000502948 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 SMG6Q86US8 1419 aaKnown RBP8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 FYB1O15117 783 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 ZCRB1Q8TBF4 217 aaKnown RBP8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 ARXQ96QS3 562 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 MEGF6O75095 1541 aa8.57□□□□□ -1.04
LSM3P4-201ENST00000502948 CLSPNQ9HAW4 1339 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 C5P01031 1676 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 UTRNP46939 3433 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 AMPHP49418 695 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 ATF5Q9Y2D1 282 aaPredicted RBP8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 FLT4P35916 1363 aa8.56□□□□□ -1.04
LSM3P4-201ENST00000502948 PNPLA7Q6ZV29 1317 aa8.55□□□□□ -1.04
LSM3P4-201ENST00000502948 ITGB4P16144 1822 aa8.55□□□□□ -1.04
LSM3P4-201ENST00000502948 USP47Q96K76 1375 aa8.55□□□□□ -1.04
LSM3P4-201ENST00000502948 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 POLD1P28340 1107 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 FLAD1Q8NFF5 587 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
LSM3P4-201ENST00000502948 NKX1-1Q15270 411 aaPredicted RBP8.53□□□□□ -1.04
LSM3P4-201ENST00000502948 ZNF784Q8NCA9 323 aaPredicted RBP8.53□□□□□ -1.04
LSM3P4-201ENST00000502948 RAPGEF4Q8WZA2 1011 aa8.53□□□□□ -1.04
LSM3P4-201ENST00000502948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSM3P4-201ENST00000502948 TOGARAM1Q9Y4F4 1720 aa8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 UBR3Q6ZT12 1888 aa8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
LSM3P4-201ENST00000502948 RRS1Q15050 365 aaKnown RBP8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
LSM3P4-201ENST00000502948 GRIN3BO60391 1043 aa8.5□□□□□ -1.05
LSM3P4-201ENST00000502948 FBLN1P23142 703 aa8.5□□□□□ -1.05
LSM3P4-201ENST00000502948 SYTL4Q96C24 671 aaPredicted RBP8.5□□□□□ -1.05
LSM3P4-201ENST00000502948 CD2APQ9Y5K6 639 aa8.5□□□□□ -1.05
LSM3P4-201ENST00000502948 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
LSM3P4-201ENST00000502948 CYP27B1O15528 508 aa8.49□□□□□ -1.05
LSM3P4-201ENST00000502948 COL23A1Q86Y22 540 aaPredicted RBP8.49□□□□□ -1.05
LSM3P4-201ENST00000502948 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
LSM3P4-201ENST00000502948 KIF13BQ9NQT8 1826 aa8.48□□□□□ -1.05
LSM3P4-201ENST00000502948 GPR162Q16538 588 aa8.48□□□□□ -1.05
LSM3P4-201ENST00000502948 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
LSM3P4-201ENST00000502948 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
LSM3P4-201ENST00000502948 SSFA2P28290 1259 aa8.47□□□□□ -1.05
LSM3P4-201ENST00000502948 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
LSM3P4-201ENST00000502948 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
LSM3P4-201ENST00000502948 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
LSM3P4-201ENST00000502948 GOLGB1Q14789 3259 aaKnown RBP8.46□□□□□ -1.06
LSM3P4-201ENST00000502948 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.06
LSM3P4-201ENST00000502948 KCNQ4P56696 695 aa8.45□□□□□ -1.06
LSM3P4-201ENST00000502948 MPRIPQ6WCQ1 1025 aa8.45□□□□□ -1.06
LSM3P4-201ENST00000502948 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
LSM3P4-201ENST00000502948 EYA1Q99502 592 aa8.45□□□□□ -1.06
LSM3P4-201ENST00000502948 POLKQ9UBT6 870 aa8.45□□□□□ -1.06
LSM3P4-201ENST00000502948 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 ERVV-2B6SEH9 535 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 PHKG2P15735 406 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 SIK1P57059 783 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 NLGN2Q8NFZ4 835 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 PIGBQ92521 554 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 KDRP35968 1356 aa8.44□□□□□ -1.06
LSM3P4-201ENST00000502948 HSP90AB1P08238 724 aaKnown RBP8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 YBX3P16989 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 AK7Q96M32 723 aa8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 ADCY9O60503 1353 aa8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 BRCA1P38398 1863 aaKnown RBP8.43□□□□□ -1.06
LSM3P4-201ENST00000502948 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
LSM3P4-201ENST00000502948 ADRA2BP18089 450 aa8.42□□□□□ -1.06
LSM3P4-201ENST00000502948 AMOTQ4VCS5 1084 aa8.42□□□□□ -1.06
LSM3P4-201ENST00000502948 RC3H1Q5TC82 1133 aaKnown RBP8.42□□□□□ -1.06
LSM3P4-201ENST00000502948 DCAF5Q96JK2 942 aa8.42□□□□□ -1.06
LSM3P4-201ENST00000502948 SCN11AQ9UI33 1791 aa8.41□□□□□ -1.06
LSM3P4-201ENST00000502948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
LSM3P4-201ENST00000502948 MSH5O43196 834 aa8.41□□□□□ -1.06
LSM3P4-201ENST00000502948 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
LSM3P4-201ENST00000502948 EIF4A2Q14240 407 aaKnown RBP8.41□□□□□ -1.06
LSM3P4-201ENST00000502948 ATG3Q9NT62 314 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms