RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
LINC00955-201ENST00000502775 LY75O60449 1722 aa17.98■□□□□ 0.47
LINC00955-201ENST00000502775 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
LINC00955-201ENST00000502775 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
LINC00955-201ENST00000502775 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
LINC00955-201ENST00000502775 POLD1P28340 1107 aa17.97■□□□□ 0.47
LINC00955-201ENST00000502775 MEGF6O75095 1541 aa17.97■□□□□ 0.47
LINC00955-201ENST00000502775 USP47Q96K76 1375 aa17.96■□□□□ 0.47
LINC00955-201ENST00000502775 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
LINC00955-201ENST00000502775 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
LINC00955-201ENST00000502775 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
LINC00955-201ENST00000502775 COL24A1Q17RW2 1714 aa17.95■□□□□ 0.46
LINC00955-201ENST00000502775 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
LINC00955-201ENST00000502775 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
LINC00955-201ENST00000502775 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
LINC00955-201ENST00000502775 NSD2O96028 1365 aa17.93■□□□□ 0.46
LINC00955-201ENST00000502775 FYB1O15117 783 aa17.93■□□□□ 0.46
LINC00955-201ENST00000502775 TATP17735 454 aaPredicted RBP17.93■□□□□ 0.46
LINC00955-201ENST00000502775 RRS1Q15050 365 aaKnown RBP17.93■□□□□ 0.46
LINC00955-201ENST00000502775 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
LINC00955-201ENST00000502775 PNPLA7Q6ZV29 1317 aa17.93■□□□□ 0.46
LINC00955-201ENST00000502775 FLT4P35916 1363 aa17.92■□□□□ 0.46
LINC00955-201ENST00000502775 FBLN1P23142 703 aa17.92■□□□□ 0.46
LINC00955-201ENST00000502775 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
LINC00955-201ENST00000502775 INSRP06213 1382 aa17.91■□□□□ 0.46
LINC00955-201ENST00000502775 NBPF6Q5VWK0 638 aa17.91■□□□□ 0.46
LINC00955-201ENST00000502775 ZNF784Q8NCA9 323 aaPredicted RBP17.91■□□□□ 0.46
LINC00955-201ENST00000502775 NBPF4Q96M43 638 aa17.91■□□□□ 0.46
LINC00955-201ENST00000502775 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
LINC00955-201ENST00000502775 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
LINC00955-201ENST00000502775 KLHL34Q8N239 644 aa17.9■□□□□ 0.46
LINC00955-201ENST00000502775 GPR162Q16538 588 aa17.89■□□□□ 0.45
LINC00955-201ENST00000502775 USHBP1Q8N6Y0 703 aa17.88■□□□□ 0.45
LINC00955-201ENST00000502775 C5P01031 1676 aa17.87■□□□□ 0.45
LINC00955-201ENST00000502775 KCNQ4P56696 695 aa17.87■□□□□ 0.45
LINC00955-201ENST00000502775 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
LINC00955-201ENST00000502775 MSH5O43196 834 aa17.86■□□□□ 0.45
LINC00955-201ENST00000502775 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
LINC00955-201ENST00000502775 PKD1L3Q7Z443 1732 aa17.85■□□□□ 0.45
LINC00955-201ENST00000502775 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
LINC00955-201ENST00000502775 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
LINC00955-201ENST00000502775 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
LINC00955-201ENST00000502775 ANKRD26Q9UPS8 1709 aa17.84■□□□□ 0.45
LINC00955-201ENST00000502775 PALLDQ8WX93 1383 aa17.83■□□□□ 0.45
LINC00955-201ENST00000502775 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
LINC00955-201ENST00000502775 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
LINC00955-201ENST00000502775 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
LINC00955-201ENST00000502775 ITGB4P16144 1822 aa17.83■□□□□ 0.44
LINC00955-201ENST00000502775 COL23A1Q86Y22 540 aaPredicted RBP17.81■□□□□ 0.44
LINC00955-201ENST00000502775 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
LINC00955-201ENST00000502775 NCAPD2Q15021 1401 aa17.81■□□□□ 0.44
LINC00955-201ENST00000502775 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
LINC00955-201ENST00000502775 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
LINC00955-201ENST00000502775 SPG7Q9UQ90 795 aa17.8■□□□□ 0.44
LINC00955-201ENST00000502775 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
LINC00955-201ENST00000502775 MAP2P11137 1827 aaKnown RBP17.79■□□□□ 0.44
LINC00955-201ENST00000502775 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
LINC00955-201ENST00000502775 CYP27B1O15528 508 aa17.79■□□□□ 0.44
LINC00955-201ENST00000502775 NLGN2Q8NFZ4 835 aa17.79■□□□□ 0.44
LINC00955-201ENST00000502775 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
LINC00955-201ENST00000502775 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
LINC00955-201ENST00000502775 AK7Q96M32 723 aa17.78■□□□□ 0.44
LINC00955-201ENST00000502775 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.44
LINC00955-201ENST00000502775 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
LINC00955-201ENST00000502775 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
LINC00955-201ENST00000502775 NKX1-1Q15270 411 aaPredicted RBP17.76■□□□□ 0.43
LINC00955-201ENST00000502775 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
LINC00955-201ENST00000502775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC00955-201ENST00000502775 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
LINC00955-201ENST00000502775 UBR3Q6ZT12 1888 aa17.75■□□□□ 0.43
LINC00955-201ENST00000502775 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
LINC00955-201ENST00000502775 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
LINC00955-201ENST00000502775 GIGYF1O75420 1035 aaPredicted RBP17.74■□□□□ 0.43
LINC00955-201ENST00000502775 PIGBQ92521 554 aa17.73■□□□□ 0.43
LINC00955-201ENST00000502775 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
LINC00955-201ENST00000502775 SSFA2P28290 1259 aa17.72■□□□□ 0.43
LINC00955-201ENST00000502775 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
LINC00955-201ENST00000502775 EYA1Q99502 592 aa17.72■□□□□ 0.43
LINC00955-201ENST00000502775 LOC102724428A0A0B4J2F2 783 aa17.71■□□□□ 0.43
LINC00955-201ENST00000502775 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00955-201ENST00000502775 SIK1P57059 783 aa17.71■□□□□ 0.43
LINC00955-201ENST00000502775 PHF14O94880 888 aa17.7■□□□□ 0.42
LINC00955-201ENST00000502775 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
LINC00955-201ENST00000502775 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
LINC00955-201ENST00000502775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
LINC00955-201ENST00000502775 PHKG2P15735 406 aa17.69■□□□□ 0.42
LINC00955-201ENST00000502775 UTRNP46939 3433 aa17.68■□□□□ 0.42
LINC00955-201ENST00000502775 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
LINC00955-201ENST00000502775 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
LINC00955-201ENST00000502775 ATP6V1AP38606 617 aa17.66■□□□□ 0.42
LINC00955-201ENST00000502775 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
LINC00955-201ENST00000502775 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
LINC00955-201ENST00000502775 GNPATO15228 680 aa17.65■□□□□ 0.42
LINC00955-201ENST00000502775 EIF4G2P78344 907 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00955-201ENST00000502775 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
LINC00955-201ENST00000502775 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
LINC00955-201ENST00000502775 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
LINC00955-201ENST00000502775 ATP10DQ9P241 1426 aa17.64■□□□□ 0.41
LINC00955-201ENST00000502775 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
LINC00955-201ENST00000502775 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms