RNA–Protein interactions for RNA: ENST00000502741.5

SPOCK3-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,032 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-205ENST00000502741 FBLN1P23142 703 aa31.2■■■□□ 2.59
SPOCK3-205ENST00000502741 TFCP2L1Q9NZI6 479 aa31.2■■■□□ 2.59
SPOCK3-205ENST00000502741 SHANK3Q9BYB0 1731 aa31.2■■■□□ 2.58
SPOCK3-205ENST00000502741 LY75O60449 1722 aa31.19■■■□□ 2.58
SPOCK3-205ENST00000502741 HOXC9P31274 260 aa31.19■■■□□ 2.58
SPOCK3-205ENST00000502741 C1QTNF8P60827 252 aa31.18■■■□□ 2.58
SPOCK3-205ENST00000502741 COG3Q96JB2 828 aa31.18■■■□□ 2.58
SPOCK3-205ENST00000502741 SENP3-EIF4A1A0A087X0R7 540 aa31.17■■■□□ 2.58
SPOCK3-205ENST00000502741 MEGF6O75095 1541 aa31.17■■■□□ 2.58
SPOCK3-205ENST00000502741 AMPHP49418 695 aa31.15■■■□□ 2.58
SPOCK3-205ENST00000502741 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
SPOCK3-205ENST00000502741 ZCRB1Q8TBF4 217 aaKnown RBP31.15■■■□□ 2.58
SPOCK3-205ENST00000502741 TESK2Q96S53 571 aa31.15■■■□□ 2.58
SPOCK3-205ENST00000502741 NLGN2Q8NFZ4 835 aa31.14■■■□□ 2.58
SPOCK3-205ENST00000502741 TONSLQ96HA7 1378 aa31.13■■■□□ 2.57
SPOCK3-205ENST00000502741 CCNL1Q9UK58 526 aaPredicted RBP31.11■■■□□ 2.57
SPOCK3-205ENST00000502741 ST20-MTHFSA0A0A6YYL1 179 aa31.09■■■□□ 2.57
SPOCK3-205ENST00000502741 RRS1Q15050 365 aaKnown RBP31.07■■■□□ 2.56
SPOCK3-205ENST00000502741 NBPF6Q5VWK0 638 aa31.07■■■□□ 2.56
SPOCK3-205ENST00000502741 NBPF4Q96M43 638 aa31.07■■■□□ 2.56
SPOCK3-205ENST00000502741 RTL1A6NKG5 1358 aa31.06■■■□□ 2.56
SPOCK3-205ENST00000502741 COL23A1Q86Y22 540 aaPredicted RBP31.06■■■□□ 2.56
SPOCK3-205ENST00000502741 USHBP1Q8N6Y0 703 aa31.06■■■□□ 2.56
SPOCK3-205ENST00000502741 USP47Q96K76 1375 aa31.05■■■□□ 2.56
SPOCK3-205ENST00000502741 MSH5O43196 834 aa31.05■■■□□ 2.56
SPOCK3-205ENST00000502741 GIGYF1O75420 1035 aaPredicted RBP31.03■■■□□ 2.56
SPOCK3-205ENST00000502741 YBX3P16989 372 aaKnown RBP eCLIP31.02■■■□□ 2.56
SPOCK3-205ENST00000502741 MSL1Q68DK7 614 aa31.01■■■□□ 2.55
SPOCK3-205ENST00000502741 GGNBP2Q9H3C7 697 aa31.01■■■□□ 2.55
SPOCK3-205ENST00000502741 GOLGB1Q14789 3259 aaKnown RBP31■■■□□ 2.55
SPOCK3-205ENST00000502741 FYB1O15117 783 aa31■■■□□ 2.55
SPOCK3-205ENST00000502741 CGNL1Q0VF96 1302 aa30.99■■■□□ 2.55
SPOCK3-205ENST00000502741 RAPGEF4Q8WZA2 1011 aa30.99■■■□□ 2.55
SPOCK3-205ENST00000502741 C5P01031 1676 aa30.99■■■□□ 2.55
SPOCK3-205ENST00000502741 SMG6Q86US8 1419 aaKnown RBP30.97■■■□□ 2.55
SPOCK3-205ENST00000502741 GRIN3BO60391 1043 aa30.96■■■□□ 2.55
SPOCK3-205ENST00000502741 SLC24A1O60721 1099 aa30.95■■■□□ 2.55
SPOCK3-205ENST00000502741 TATP17735 454 aaPredicted RBP30.95■■■□□ 2.55
SPOCK3-205ENST00000502741 HSP90AB2PQ58FF8 381 aa30.93■■■□□ 2.54
SPOCK3-205ENST00000502741 TAF1LQ8IZX4 1826 aa30.93■■■□□ 2.54
SPOCK3-205ENST00000502741 PCDH11XQ9BZA7 1347 aa30.93■■■□□ 2.54
SPOCK3-205ENST00000502741 PCDH11YQ9BZA8 1340 aa30.93■■■□□ 2.54
SPOCK3-205ENST00000502741 PALLDQ8WX93 1383 aa30.92■■■□□ 2.54
SPOCK3-205ENST00000502741 INSRP06213 1382 aa30.92■■■□□ 2.54
SPOCK3-205ENST00000502741 KIF20BQ96Q89 1820 aa30.89■■■□□ 2.54
SPOCK3-205ENST00000502741 CYP27B1O15528 508 aa30.89■■■□□ 2.54
SPOCK3-205ENST00000502741 MPRIPQ6WCQ1 1025 aa30.89■■■□□ 2.54
SPOCK3-205ENST00000502741 TOGARAM1Q9Y4F4 1720 aa30.89■■■□□ 2.54
SPOCK3-205ENST00000502741 FLT4P35916 1363 aa30.89■■■□□ 2.54
SPOCK3-205ENST00000502741 TMF1P82094 1093 aa30.87■■■□□ 2.53
SPOCK3-205ENST00000502741 CD2APQ9Y5K6 639 aa30.87■■■□□ 2.53
SPOCK3-205ENST00000502741 FLAD1Q8NFF5 587 aa30.86■■■□□ 2.53
SPOCK3-205ENST00000502741 ATP10DQ9P241 1426 aa30.86■■■□□ 2.53
SPOCK3-205ENST00000502741 ITGB4P16144 1822 aa30.86■■■□□ 2.53
SPOCK3-205ENST00000502741 C4BP0C0L5 1744 aa30.85■■■□□ 2.53
SPOCK3-205ENST00000502741 AMIGO3Q86WK7 504 aa30.85■■■□□ 2.53
SPOCK3-205ENST00000502741 KIF24Q5T7B8 1368 aa30.83■■■□□ 2.53
SPOCK3-205ENST00000502741 PKD1L3Q7Z443 1732 aa30.82■■■□□ 2.52
SPOCK3-205ENST00000502741 HMGB2P26583 209 aaKnown RBP30.81■■■□□ 2.52
SPOCK3-205ENST00000502741 SMIM5Q71RC9 77 aa30.81■■■□□ 2.52
SPOCK3-205ENST00000502741 AK7Q96M32 723 aa30.81■■■□□ 2.52
SPOCK3-205ENST00000502741 EMILIN1Q9Y6C2 1016 aa30.81■■■□□ 2.52
SPOCK3-205ENST00000502741 UBR3Q6ZT12 1888 aa30.8■■■□□ 2.52
SPOCK3-205ENST00000502741 SMARCC1Q92922 1105 aaPredicted RBP30.8■■■□□ 2.52
SPOCK3-205ENST00000502741 PIGBQ92521 554 aa30.79■■■□□ 2.52
SPOCK3-205ENST00000502741 PHF14O94880 888 aa30.78■■■□□ 2.52
SPOCK3-205ENST00000502741 CARD14Q9BXL6 1004 aa30.77■■■□□ 2.52
SPOCK3-205ENST00000502741 NCAPD2Q15021 1401 aa30.76■■■□□ 2.51
SPOCK3-205ENST00000502741 ADCY9O60503 1353 aa30.76■■■□□ 2.51
SPOCK3-205ENST00000502741 MAP2P11137 1827 aaKnown RBP30.75■■■□□ 2.51
SPOCK3-205ENST00000502741 CEP350Q5VT06 3117 aa30.74■■■□□ 2.51
SPOCK3-205ENST00000502741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.74■■■□□ 2.51
SPOCK3-205ENST00000502741 NKX1-1Q15270 411 aaPredicted RBP30.74■■■□□ 2.51
SPOCK3-205ENST00000502741 WWC3Q9ULE0 1092 aa30.74■■■□□ 2.51
SPOCK3-205ENST00000502741 NSD3Q9BZ95 1437 aa30.73■■■□□ 2.51
SPOCK3-205ENST00000502741 GPBP1L1Q9HC44 474 aaPredicted RBP30.73■■■□□ 2.51
SPOCK3-205ENST00000502741 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
SPOCK3-205ENST00000502741 CDCA8Q53HL2 280 aa30.72■■■□□ 2.51
SPOCK3-205ENST00000502741 LINC00116Q8NCU8 138 aa30.72■■■□□ 2.51
SPOCK3-205ENST00000502741 PPM1GO15355 546 aaPredicted RBP30.71■■■□□ 2.51
SPOCK3-205ENST00000502741 ANKRD26Q9UPS8 1709 aa30.7■■■□□ 2.51
SPOCK3-205ENST00000502741 LOC102724428A0A0B4J2F2 783 aa30.7■■■□□ 2.51
SPOCK3-205ENST00000502741 SIK1P57059 783 aa30.7■■■□□ 2.51
SPOCK3-205ENST00000502741 ZNF526Q8TF50 670 aaPredicted RBP30.7■■■□□ 2.51
SPOCK3-205ENST00000502741 SPG7Q9UQ90 795 aa30.7■■■□□ 2.51
SPOCK3-205ENST00000502741 SSFA2P28290 1259 aa30.69■■■□□ 2.5
SPOCK3-205ENST00000502741 ITPK1Q13572 414 aa30.67■■■□□ 2.5
SPOCK3-205ENST00000502741 EYA1Q99502 592 aa30.67■■■□□ 2.5
SPOCK3-205ENST00000502741 TMOD3Q9NYL9 352 aa30.66■■■□□ 2.5
SPOCK3-205ENST00000502741 ASAP1Q9ULH1 1129 aa30.66■■■□□ 2.5
SPOCK3-205ENST00000502741 WASHC2AQ641Q2 1341 aa30.66■■■□□ 2.5
SPOCK3-205ENST00000502741 IFFO2Q5TF58 517 aa30.65■■■□□ 2.5
SPOCK3-205ENST00000502741 GNPATO15228 680 aa30.64■■■□□ 2.5
SPOCK3-205ENST00000502741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.63■■■□□ 2.49
SPOCK3-205ENST00000502741 PHKG2P15735 406 aa30.61■■■□□ 2.49
SPOCK3-205ENST00000502741 ATP6V1AP38606 617 aa30.61■■■□□ 2.49
SPOCK3-205ENST00000502741 HSPA6P17066 643 aa30.6■■■□□ 2.49
SPOCK3-205ENST00000502741 IFNL2Q8IZJ0 200 aa30.6■■■□□ 2.49
SPOCK3-205ENST00000502741 ATG3Q9NT62 314 aa30.59■■■□□ 2.49
SPOCK3-205ENST00000502741 POLKQ9UBT6 870 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms