RNA–Protein interactions for RNA: ENST00000502724.5

PRDM2-211, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-211ENST00000502724 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-211ENST00000502724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRDM2-211ENST00000502724 BCL9O00512 1426 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 COL3A1P02461 1466 aaPredicted RBP13.64□□□□□ -0.23
PRDM2-211ENST00000502724 KDRP35968 1356 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 ANP32CO43423 234 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
PRDM2-211ENST00000502724 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
PRDM2-211ENST00000502724 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
PRDM2-211ENST00000502724 USHBP1Q8N6Y0 703 aa13.63□□□□□ -0.23
PRDM2-211ENST00000502724 MEGF6O75095 1541 aa13.63□□□□□ -0.23
PRDM2-211ENST00000502724 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
PRDM2-211ENST00000502724 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
PRDM2-211ENST00000502724 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
PRDM2-211ENST00000502724 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
PRDM2-211ENST00000502724 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
PRDM2-211ENST00000502724 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
PRDM2-211ENST00000502724 NEFMP07197 916 aa13.6□□□□□ -0.23
PRDM2-211ENST00000502724 MARCH10Q8NA82 808 aaPredicted RBP13.59□□□□□ -0.23
PRDM2-211ENST00000502724 FCHSD2O94868 740 aa13.58□□□□□ -0.24
PRDM2-211ENST00000502724 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.24
PRDM2-211ENST00000502724 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
PRDM2-211ENST00000502724 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
PRDM2-211ENST00000502724 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRDM2-211ENST00000502724 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
PRDM2-211ENST00000502724 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
PRDM2-211ENST00000502724 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRDM2-211ENST00000502724 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
PRDM2-211ENST00000502724 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
PRDM2-211ENST00000502724 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
PRDM2-211ENST00000502724 EP400Q96L91 3159 aa13.56□□□□□ -0.24
PRDM2-211ENST00000502724 HMOX1P09601 288 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 BAG6P46379 1132 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRDM2-211ENST00000502724 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
PRDM2-211ENST00000502724 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
PRDM2-211ENST00000502724 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
PRDM2-211ENST00000502724 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
PRDM2-211ENST00000502724 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
PRDM2-211ENST00000502724 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
PRDM2-211ENST00000502724 RGPD3A6NKT7 1758 aaPredicted RBP13.53□□□□□ -0.24
PRDM2-211ENST00000502724 RGPD4Q7Z3J3 1758 aa13.53□□□□□ -0.24
PRDM2-211ENST00000502724 TRIM37O94972 964 aa13.53□□□□□ -0.24
PRDM2-211ENST00000502724 PHKG2P15735 406 aa13.53□□□□□ -0.24
PRDM2-211ENST00000502724 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
PRDM2-211ENST00000502724 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
PRDM2-211ENST00000502724 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
PRDM2-211ENST00000502724 CYP27B1O15528 508 aa13.52□□□□□ -0.25
PRDM2-211ENST00000502724 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
PRDM2-211ENST00000502724 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
PRDM2-211ENST00000502724 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.25
PRDM2-211ENST00000502724 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
PRDM2-211ENST00000502724 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
PRDM2-211ENST00000502724 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
PRDM2-211ENST00000502724 PLSCR1O15162 318 aa13.5□□□□□ -0.25
PRDM2-211ENST00000502724 APBA3O96018 575 aa13.5□□□□□ -0.25
PRDM2-211ENST00000502724 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-211ENST00000502724 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
PRDM2-211ENST00000502724 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
PRDM2-211ENST00000502724 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 MRS2Q9HD23 443 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 BTAF1O14981 1849 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 ITGB4P16144 1822 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
PRDM2-211ENST00000502724 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
PRDM2-211ENST00000502724 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
PRDM2-211ENST00000502724 DIEXFQ68CQ4 756 aaKnown RBP13.47□□□□□ -0.25
PRDM2-211ENST00000502724 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
PRDM2-211ENST00000502724 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-211ENST00000502724 RUNDC1Q96C34 613 aa13.46□□□□□ -0.25
PRDM2-211ENST00000502724 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
PRDM2-211ENST00000502724 TOGARAM1Q9Y4F4 1720 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 KCNQ2O43526 872 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 CABP4P57796 275 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
PRDM2-211ENST00000502724 CCER2I3L3R5 266 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 SLC27A3Q5K4L6 730 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
PRDM2-211ENST00000502724 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
PRDM2-211ENST00000502724 MRC1P22897 1456 aa13.43□□□□□ -0.26
PRDM2-211ENST00000502724 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
PRDM2-211ENST00000502724 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-211ENST00000502724 TEFQ10587 303 aa13.43□□□□□ -0.26
PRDM2-211ENST00000502724 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
PRDM2-211ENST00000502724 RREB1Q92766 1687 aa13.43□□□□□ -0.26
PRDM2-211ENST00000502724 LY75O60449 1722 aa13.42□□□□□ -0.26
PRDM2-211ENST00000502724 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms