RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
CDK7-202ENST00000502604 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
CDK7-202ENST00000502604 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
CDK7-202ENST00000502604 PAPPAQ13219 1627 aa16.46■□□□□ 0.23
CDK7-202ENST00000502604 UTRNP46939 3433 aa16.46■□□□□ 0.23
CDK7-202ENST00000502604 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
CDK7-202ENST00000502604 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
CDK7-202ENST00000502604 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
CDK7-202ENST00000502604 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
CDK7-202ENST00000502604 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
CDK7-202ENST00000502604 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
CDK7-202ENST00000502604 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
CDK7-202ENST00000502604 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
CDK7-202ENST00000502604 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
CDK7-202ENST00000502604 FLT4P35916 1363 aa16.43■□□□□ 0.22
CDK7-202ENST00000502604 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
CDK7-202ENST00000502604 INSRP06213 1382 aa16.42■□□□□ 0.22
CDK7-202ENST00000502604 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
CDK7-202ENST00000502604 LY75O60449 1722 aa16.41■□□□□ 0.22
CDK7-202ENST00000502604 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
CDK7-202ENST00000502604 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
CDK7-202ENST00000502604 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
CDK7-202ENST00000502604 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDK7-202ENST00000502604 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
CDK7-202ENST00000502604 STK32BQ9NY57 414 aa16.4■□□□□ 0.22
CDK7-202ENST00000502604 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
CDK7-202ENST00000502604 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.22
CDK7-202ENST00000502604 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
CDK7-202ENST00000502604 NSD2O96028 1365 aa16.38■□□□□ 0.21
CDK7-202ENST00000502604 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
CDK7-202ENST00000502604 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
CDK7-202ENST00000502604 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
CDK7-202ENST00000502604 PPP1R1BQ9UD71 204 aaPredicted RBP16.38■□□□□ 0.21
CDK7-202ENST00000502604 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
CDK7-202ENST00000502604 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
CDK7-202ENST00000502604 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
CDK7-202ENST00000502604 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
CDK7-202ENST00000502604 QSER1Q2KHR3 1735 aa16.37■□□□□ 0.21
CDK7-202ENST00000502604 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
CDK7-202ENST00000502604 ITGB4P16144 1822 aa16.37■□□□□ 0.21
CDK7-202ENST00000502604 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
CDK7-202ENST00000502604 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
CDK7-202ENST00000502604 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
CDK7-202ENST00000502604 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
CDK7-202ENST00000502604 PTGER2P43116 358 aa16.34■□□□□ 0.21
CDK7-202ENST00000502604 KCNQ4P56696 695 aa16.34■□□□□ 0.21
CDK7-202ENST00000502604 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
CDK7-202ENST00000502604 PANK3Q9H999 370 aa16.33■□□□□ 0.2
CDK7-202ENST00000502604 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
CDK7-202ENST00000502604 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.2
CDK7-202ENST00000502604 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.2
CDK7-202ENST00000502604 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
CDK7-202ENST00000502604 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
CDK7-202ENST00000502604 C5P01031 1676 aa16.31■□□□□ 0.2
CDK7-202ENST00000502604 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
CDK7-202ENST00000502604 CYP27B1O15528 508 aa16.3■□□□□ 0.2
CDK7-202ENST00000502604 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
CDK7-202ENST00000502604 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
CDK7-202ENST00000502604 EYA1Q99502 592 aa16.29■□□□□ 0.2
CDK7-202ENST00000502604 COL24A1Q17RW2 1714 aa16.29■□□□□ 0.2
CDK7-202ENST00000502604 SGIP1Q9BQI5 828 aa16.29■□□□□ 0.2
CDK7-202ENST00000502604 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
CDK7-202ENST00000502604 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
CDK7-202ENST00000502604 PNPLA7Q6ZV29 1317 aa16.27■□□□□ 0.2
CDK7-202ENST00000502604 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
CDK7-202ENST00000502604 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
CDK7-202ENST00000502604 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
CDK7-202ENST00000502604 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
CDK7-202ENST00000502604 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
CDK7-202ENST00000502604 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
CDK7-202ENST00000502604 C4BP0C0L5 1744 aa16.23■□□□□ 0.19
CDK7-202ENST00000502604 MORC1Q86VD1 984 aa16.22■□□□□ 0.19
CDK7-202ENST00000502604 ARXQ96QS3 562 aa16.22■□□□□ 0.19
CDK7-202ENST00000502604 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
CDK7-202ENST00000502604 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
CDK7-202ENST00000502604 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
CDK7-202ENST00000502604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDK7-202ENST00000502604 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
CDK7-202ENST00000502604 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.19
CDK7-202ENST00000502604 SLC16A10Q8TF71 515 aa16.21■□□□□ 0.19
CDK7-202ENST00000502604 PIGBQ92521 554 aa16.21■□□□□ 0.19
CDK7-202ENST00000502604 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
CDK7-202ENST00000502604 PHKG2P15735 406 aa16.2■□□□□ 0.18
CDK7-202ENST00000502604 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
CDK7-202ENST00000502604 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
CDK7-202ENST00000502604 YY1P25490 414 aa16.18■□□□□ 0.18
CDK7-202ENST00000502604 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
CDK7-202ENST00000502604 CHD4Q14839 1912 aa16.18■□□□□ 0.18
CDK7-202ENST00000502604 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
CDK7-202ENST00000502604 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
CDK7-202ENST00000502604 AEBP1Q8IUX7 1158 aa16.17■□□□□ 0.18
CDK7-202ENST00000502604 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
CDK7-202ENST00000502604 TMOD3Q9NYL9 352 aa16.17■□□□□ 0.18
CDK7-202ENST00000502604 POLD1P28340 1107 aa16.16■□□□□ 0.18
CDK7-202ENST00000502604 VIRMAQ69YN4 1812 aaKnown RBP16.16■□□□□ 0.18
CDK7-202ENST00000502604 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
CDK7-202ENST00000502604 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
CDK7-202ENST00000502604 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
CDK7-202ENST00000502604 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
CDK7-202ENST00000502604 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms