RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
SGCA-203ENST00000502555 TATP17735 454 aaPredicted RBP17.56■□□□□ 0.4
SGCA-203ENST00000502555 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
SGCA-203ENST00000502555 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
SGCA-203ENST00000502555 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
SGCA-203ENST00000502555 GNAI1P63096 354 aa17.55■□□□□ 0.4
SGCA-203ENST00000502555 MEGF6O75095 1541 aa17.55■□□□□ 0.4
SGCA-203ENST00000502555 ADAMTS2O95450 1211 aa17.54■□□□□ 0.4
SGCA-203ENST00000502555 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
SGCA-203ENST00000502555 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
SGCA-203ENST00000502555 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
SGCA-203ENST00000502555 STRN4Q9NRL3 753 aa17.54■□□□□ 0.4
SGCA-203ENST00000502555 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
SGCA-203ENST00000502555 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
SGCA-203ENST00000502555 NUTM2BA6NNL0 878 aaPredicted RBP17.53■□□□□ 0.4
SGCA-203ENST00000502555 NUTM2EB1AL46 878 aaPredicted RBP17.53■□□□□ 0.4
SGCA-203ENST00000502555 CT47B1P0C2W7 299 aaPredicted RBP17.53■□□□□ 0.4
SGCA-203ENST00000502555 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
SGCA-203ENST00000502555 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
SGCA-203ENST00000502555 NUTM2AQ8IVF1 878 aaPredicted RBP17.53■□□□□ 0.4
SGCA-203ENST00000502555 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
SGCA-203ENST00000502555 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
SGCA-203ENST00000502555 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
SGCA-203ENST00000502555 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
SGCA-203ENST00000502555 HSPA1LP34931 641 aa17.52■□□□□ 0.4
SGCA-203ENST00000502555 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
SGCA-203ENST00000502555 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
SGCA-203ENST00000502555 MCM10Q7L590 875 aa17.52■□□□□ 0.4
SGCA-203ENST00000502555 SLIT2O94813 1529 aa17.51■□□□□ 0.39
SGCA-203ENST00000502555 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
SGCA-203ENST00000502555 NEFLP07196 543 aa17.51■□□□□ 0.39
SGCA-203ENST00000502555 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
SGCA-203ENST00000502555 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
SGCA-203ENST00000502555 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
SGCA-203ENST00000502555 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
SGCA-203ENST00000502555 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
SGCA-203ENST00000502555 IL2RBP14784 551 aa17.49■□□□□ 0.39
SGCA-203ENST00000502555 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
SGCA-203ENST00000502555 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
SGCA-203ENST00000502555 CHL1O00533 1208 aa17.48■□□□□ 0.39
SGCA-203ENST00000502555 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
SGCA-203ENST00000502555 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
SGCA-203ENST00000502555 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
SGCA-203ENST00000502555 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
SGCA-203ENST00000502555 LRP6O75581 1613 aa17.47■□□□□ 0.39
SGCA-203ENST00000502555 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
SGCA-203ENST00000502555 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
SGCA-203ENST00000502555 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
SGCA-203ENST00000502555 PCDH11XQ9BZA7 1347 aa17.46■□□□□ 0.39
SGCA-203ENST00000502555 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.39
SGCA-203ENST00000502555 DISP2A7MBM2 1401 aa17.46■□□□□ 0.39
SGCA-203ENST00000502555 PHKG2P15735 406 aa17.46■□□□□ 0.38
SGCA-203ENST00000502555 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.38
SGCA-203ENST00000502555 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.38
SGCA-203ENST00000502555 ZNF428Q96B54 188 aa17.46■□□□□ 0.38
SGCA-203ENST00000502555 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
SGCA-203ENST00000502555 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
SGCA-203ENST00000502555 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
SGCA-203ENST00000502555 THRAP3Q9Y2W1 955 aaKnown RBP17.45■□□□□ 0.38
SGCA-203ENST00000502555 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
SGCA-203ENST00000502555 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
SGCA-203ENST00000502555 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
SGCA-203ENST00000502555 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
SGCA-203ENST00000502555 CYP27B1O15528 508 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
SGCA-203ENST00000502555 TEFQ10587 303 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
SGCA-203ENST00000502555 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
SGCA-203ENST00000502555 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
SGCA-203ENST00000502555 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
SGCA-203ENST00000502555 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
SGCA-203ENST00000502555 MRC1P22897 1456 aa17.41■□□□□ 0.38
SGCA-203ENST00000502555 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
SGCA-203ENST00000502555 FKBP8Q14318 412 aa17.41■□□□□ 0.38
SGCA-203ENST00000502555 SOS1Q07889 1333 aaPredicted RBP17.4■□□□□ 0.38
SGCA-203ENST00000502555 VPS72Q15906 364 aa17.4■□□□□ 0.38
SGCA-203ENST00000502555 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
SGCA-203ENST00000502555 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
SGCA-203ENST00000502555 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
SGCA-203ENST00000502555 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
SGCA-203ENST00000502555 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.37
SGCA-203ENST00000502555 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
SGCA-203ENST00000502555 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
SGCA-203ENST00000502555 TNS2Q63HR2 1409 aa17.38■□□□□ 0.37
SGCA-203ENST00000502555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
SGCA-203ENST00000502555 VAMP4O75379 141 aa17.38■□□□□ 0.37
SGCA-203ENST00000502555 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
SGCA-203ENST00000502555 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
SGCA-203ENST00000502555 BCAR3O75815 825 aa17.37■□□□□ 0.37
SGCA-203ENST00000502555 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
SGCA-203ENST00000502555 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
SGCA-203ENST00000502555 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
SGCA-203ENST00000502555 SCN11AQ9UI33 1791 aa17.36■□□□□ 0.37
SGCA-203ENST00000502555 SHANK3Q9BYB0 1731 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms