RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 USHBP1Q8N6Y0 703 aa23.15■■□□□ 1.3
MTA1-216ENST00000498644 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
MTA1-216ENST00000498644 SHANK3Q9BYB0 1731 aa23.14■■□□□ 1.3
MTA1-216ENST00000498644 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.3
MTA1-216ENST00000498644 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
MTA1-216ENST00000498644 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
MTA1-216ENST00000498644 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
MTA1-216ENST00000498644 PANK3Q9H999 370 aa23.13■■□□□ 1.29
MTA1-216ENST00000498644 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
MTA1-216ENST00000498644 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
MTA1-216ENST00000498644 SLC15A2Q16348 729 aa23.12■■□□□ 1.29
MTA1-216ENST00000498644 PRIM1P49642 420 aaKnown RBP23.11■■□□□ 1.29
MTA1-216ENST00000498644 POLKQ9UBT6 870 aa23.11■■□□□ 1.29
MTA1-216ENST00000498644 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
MTA1-216ENST00000498644 DOT1LQ8TEK3 1739 aa23.08■■□□□ 1.29
MTA1-216ENST00000498644 SYTL4Q96C24 671 aaPredicted RBP23.08■■□□□ 1.29
MTA1-216ENST00000498644 NSD2O96028 1365 aa23.07■■□□□ 1.28
MTA1-216ENST00000498644 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
MTA1-216ENST00000498644 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
MTA1-216ENST00000498644 PCDH11XQ9BZA7 1347 aa23.07■■□□□ 1.28
MTA1-216ENST00000498644 PCDH11YQ9BZA8 1340 aa23.07■■□□□ 1.28
MTA1-216ENST00000498644 PDGFDQ9GZP0 370 aaPredicted RBP23.06■■□□□ 1.28
MTA1-216ENST00000498644 LRRC4BQ9NT99 713 aa23.06■■□□□ 1.28
MTA1-216ENST00000498644 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
MTA1-216ENST00000498644 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
MTA1-216ENST00000498644 EYA1Q99502 592 aa23.04■■□□□ 1.28
MTA1-216ENST00000498644 PPP1R1BQ9UD71 204 aaPredicted RBP23.04■■□□□ 1.28
MTA1-216ENST00000498644 CYP27B1O15528 508 aa23.01■■□□□ 1.27
MTA1-216ENST00000498644 ZBTB7AO95365 584 aa23.01■■□□□ 1.27
MTA1-216ENST00000498644 KNSTRNQ9Y448 316 aa23.01■■□□□ 1.27
MTA1-216ENST00000498644 LY75O60449 1722 aa23.01■■□□□ 1.27
MTA1-216ENST00000498644 PKD1L3Q7Z443 1732 aa23.01■■□□□ 1.27
MTA1-216ENST00000498644 EIF4A2Q14240 407 aaKnown RBP23■■□□□ 1.27
MTA1-216ENST00000498644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
MTA1-216ENST00000498644 SPG7Q9UQ90 795 aa23■■□□□ 1.27
MTA1-216ENST00000498644 ZNF827Q17R98 1081 aa22.99■■□□□ 1.27
MTA1-216ENST00000498644 MORC1Q86VD1 984 aa22.99■■□□□ 1.27
MTA1-216ENST00000498644 AKT1S1Q96B36 256 aa22.99■■□□□ 1.27
MTA1-216ENST00000498644 MTFR1LQ9H019 292 aa22.99■■□□□ 1.27
MTA1-216ENST00000498644 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
MTA1-216ENST00000498644 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
MTA1-216ENST00000498644 PTGER2P43116 358 aa22.97■■□□□ 1.27
MTA1-216ENST00000498644 NKX1-1Q15270 411 aaPredicted RBP22.97■■□□□ 1.27
MTA1-216ENST00000498644 HMGB2P26583 209 aaKnown RBP22.95■■□□□ 1.26
MTA1-216ENST00000498644 QSER1Q2KHR3 1735 aa22.95■■□□□ 1.26
MTA1-216ENST00000498644 PLEKHG2Q9H7P9 1386 aa22.95■■□□□ 1.26
MTA1-216ENST00000498644 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
MTA1-216ENST00000498644 KCNQ4P56696 695 aa22.94■■□□□ 1.26
MTA1-216ENST00000498644 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
MTA1-216ENST00000498644 IGSF1Q8N6C5 1336 aa22.93■■□□□ 1.26
MTA1-216ENST00000498644 AMER1Q5JTC6 1135 aaPredicted RBP22.93■■□□□ 1.26
MTA1-216ENST00000498644 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
MTA1-216ENST00000498644 ITGB4P16144 1822 aa22.93■■□□□ 1.26
MTA1-216ENST00000498644 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
MTA1-216ENST00000498644 SLC16A10Q8TF71 515 aa22.92■■□□□ 1.26
MTA1-216ENST00000498644 SGIP1Q9BQI5 828 aa22.92■■□□□ 1.26
MTA1-216ENST00000498644 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
MTA1-216ENST00000498644 SMARCC1Q92922 1105 aaPredicted RBP22.9■■□□□ 1.26
MTA1-216ENST00000498644 PNPLA7Q6ZV29 1317 aa22.89■■□□□ 1.26
MTA1-216ENST00000498644 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
MTA1-216ENST00000498644 PHKG2P15735 406 aa22.89■■□□□ 1.25
MTA1-216ENST00000498644 PIGBQ92521 554 aa22.89■■□□□ 1.25
MTA1-216ENST00000498644 PALLDQ8WX93 1383 aa22.89■■□□□ 1.25
MTA1-216ENST00000498644 TUBGCP6Q96RT7 1819 aa22.87■■□□□ 1.25
MTA1-216ENST00000498644 DCAF8L1A6NGE4 600 aa22.87■■□□□ 1.25
MTA1-216ENST00000498644 ARXQ96QS3 562 aa22.86■■□□□ 1.25
MTA1-216ENST00000498644 C5P01031 1676 aa22.85■■□□□ 1.25
MTA1-216ENST00000498644 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
MTA1-216ENST00000498644 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
MTA1-216ENST00000498644 TMOD3Q9NYL9 352 aa22.85■■□□□ 1.25
MTA1-216ENST00000498644 FHDC1Q9C0D6 1143 aaPredicted RBP22.84■■□□□ 1.25
MTA1-216ENST00000498644 TAF1LQ8IZX4 1826 aa22.84■■□□□ 1.25
MTA1-216ENST00000498644 COL24A1Q17RW2 1714 aa22.83■■□□□ 1.25
MTA1-216ENST00000498644 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
MTA1-216ENST00000498644 IL13P35225 146 aa22.83■■□□□ 1.25
MTA1-216ENST00000498644 SYT17Q9BSW7 474 aa22.83■■□□□ 1.25
MTA1-216ENST00000498644 ERVV-2B6SEH9 535 aa22.81■■□□□ 1.24
MTA1-216ENST00000498644 POLD1P28340 1107 aa22.81■■□□□ 1.24
MTA1-216ENST00000498644 MTHFSP49914 203 aa22.81■■□□□ 1.24
MTA1-216ENST00000498644 KDRP35968 1356 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
MTA1-216ENST00000498644 SULT6B1Q6IMI4 303 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
MTA1-216ENST00000498644 AEBP1Q8IUX7 1158 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 FLAD1Q8NFF5 587 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
MTA1-216ENST00000498644 MAP3K5Q99683 1374 aa22.79■■□□□ 1.24
MTA1-216ENST00000498644 LOC102724428A0A0B4J2F2 783 aa22.79■■□□□ 1.24
MTA1-216ENST00000498644 SIK1P57059 783 aa22.79■■□□□ 1.24
MTA1-216ENST00000498644 ZNF530Q6P9A1 599 aaPredicted RBP22.79■■□□□ 1.24
MTA1-216ENST00000498644 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
MTA1-216ENST00000498644 MSH5O43196 834 aa22.78■■□□□ 1.24
MTA1-216ENST00000498644 C4BP0C0L5 1744 aa22.77■■□□□ 1.24
MTA1-216ENST00000498644 C1orf141Q5JVX7 400 aa22.76■■□□□ 1.23
MTA1-216ENST00000498644 AK7Q96M32 723 aa22.76■■□□□ 1.23
MTA1-216ENST00000498644 ATG3Q9NT62 314 aa22.76■■□□□ 1.23
MTA1-216ENST00000498644 ATP6V1AP38606 617 aa22.73■■□□□ 1.23
MTA1-216ENST00000498644 KDM6AO15550 1401 aaPredicted RBP22.73■■□□□ 1.23
MTA1-216ENST00000498644 DIAPH1O60610 1272 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms