RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 NBPF6Q5VWK0 638 aa24.12■■□□□ 1.45
HDAC11-220ENST00000498532 USHBP1Q8N6Y0 703 aa24.12■■□□□ 1.45
HDAC11-220ENST00000498532 NBPF4Q96M43 638 aa24.12■■□□□ 1.45
HDAC11-220ENST00000498532 SYTL4Q96C24 671 aaPredicted RBP24.11■■□□□ 1.45
HDAC11-220ENST00000498532 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
HDAC11-220ENST00000498532 HSP90AB2PQ58FF8 381 aa24.1■■□□□ 1.45
HDAC11-220ENST00000498532 RAPGEF4Q8WZA2 1011 aa24.1■■□□□ 1.45
HDAC11-220ENST00000498532 ANKRD26Q9UPS8 1709 aa24.08■■□□□ 1.45
HDAC11-220ENST00000498532 MTFR1LQ9H019 292 aa24.08■■□□□ 1.45
HDAC11-220ENST00000498532 ATF5Q9Y2D1 282 aaPredicted RBP24.08■■□□□ 1.45
HDAC11-220ENST00000498532 PTGER2P43116 358 aa24.07■■□□□ 1.44
HDAC11-220ENST00000498532 PRIM1P49642 420 aaKnown RBP24.07■■□□□ 1.44
HDAC11-220ENST00000498532 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
HDAC11-220ENST00000498532 LRRC4BQ9NT99 713 aa24.07■■□□□ 1.44
HDAC11-220ENST00000498532 NSD2O96028 1365 aa24.06■■□□□ 1.44
HDAC11-220ENST00000498532 TATP17735 454 aaPredicted RBP24.06■■□□□ 1.44
HDAC11-220ENST00000498532 ZNF827Q17R98 1081 aa24.06■■□□□ 1.44
HDAC11-220ENST00000498532 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
HDAC11-220ENST00000498532 EMILIN1Q9Y6C2 1016 aa24.06■■□□□ 1.44
HDAC11-220ENST00000498532 LY75O60449 1722 aa24.05■■□□□ 1.44
HDAC11-220ENST00000498532 DCAF8L1A6NGE4 600 aa24.05■■□□□ 1.44
HDAC11-220ENST00000498532 PCDH11XQ9BZA7 1347 aa24.04■■□□□ 1.44
HDAC11-220ENST00000498532 PCDH11YQ9BZA8 1340 aa24.04■■□□□ 1.44
HDAC11-220ENST00000498532 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
HDAC11-220ENST00000498532 QSER1Q2KHR3 1735 aa24.03■■□□□ 1.44
HDAC11-220ENST00000498532 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
HDAC11-220ENST00000498532 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
HDAC11-220ENST00000498532 AKT1S1Q96B36 256 aa24.01■■□□□ 1.43
HDAC11-220ENST00000498532 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
HDAC11-220ENST00000498532 MAP2P11137 1827 aaKnown RBP24■■□□□ 1.43
HDAC11-220ENST00000498532 TUBGCP6Q96RT7 1819 aa23.99■■□□□ 1.43
HDAC11-220ENST00000498532 SGIP1Q9BQI5 828 aa23.99■■□□□ 1.43
HDAC11-220ENST00000498532 KCNQ4P56696 695 aa23.98■■□□□ 1.43
HDAC11-220ENST00000498532 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
HDAC11-220ENST00000498532 HSPA5P11021 654 aaKnown RBP23.97■■□□□ 1.43
HDAC11-220ENST00000498532 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
HDAC11-220ENST00000498532 FHDC1Q9C0D6 1143 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-220ENST00000498532 TFCP2L1Q9NZI6 479 aa23.97■■□□□ 1.43
HDAC11-220ENST00000498532 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-220ENST00000498532 UTRNP46939 3433 aa23.97■■□□□ 1.43
HDAC11-220ENST00000498532 PNPLA7Q6ZV29 1317 aa23.95■■□□□ 1.42
HDAC11-220ENST00000498532 YY1P25490 414 aa23.95■■□□□ 1.42
HDAC11-220ENST00000498532 ARXQ96QS3 562 aa23.95■■□□□ 1.42
HDAC11-220ENST00000498532 TOGARAM1Q9Y4F4 1720 aa23.95■■□□□ 1.42
HDAC11-220ENST00000498532 C5P01031 1676 aa23.93■■□□□ 1.42
HDAC11-220ENST00000498532 CYP27B1O15528 508 aa23.93■■□□□ 1.42
HDAC11-220ENST00000498532 SLC16A10Q8TF71 515 aa23.93■■□□□ 1.42
HDAC11-220ENST00000498532 SYT17Q9BSW7 474 aa23.93■■□□□ 1.42
HDAC11-220ENST00000498532 POLKQ9UBT6 870 aa23.93■■□□□ 1.42
HDAC11-220ENST00000498532 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-220ENST00000498532 ITGB4P16144 1822 aa23.91■■□□□ 1.42
HDAC11-220ENST00000498532 MPRIPQ6WCQ1 1025 aa23.91■■□□□ 1.42
HDAC11-220ENST00000498532 PALLDQ8WX93 1383 aa23.91■■□□□ 1.42
HDAC11-220ENST00000498532 EYA1Q99502 592 aa23.9■■□□□ 1.42
HDAC11-220ENST00000498532 SPG7Q9UQ90 795 aa23.9■■□□□ 1.42
HDAC11-220ENST00000498532 COL24A1Q17RW2 1714 aa23.9■■□□□ 1.42
HDAC11-220ENST00000498532 MAP3K5Q99683 1374 aa23.9■■□□□ 1.42
HDAC11-220ENST00000498532 POLD1P28340 1107 aa23.89■■□□□ 1.41
HDAC11-220ENST00000498532 PANK3Q9H999 370 aa23.89■■□□□ 1.41
HDAC11-220ENST00000498532 TAF1LQ8IZX4 1826 aa23.87■■□□□ 1.41
HDAC11-220ENST00000498532 EIF4A2Q14240 407 aaKnown RBP23.86■■□□□ 1.41
HDAC11-220ENST00000498532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.86■■□□□ 1.41
HDAC11-220ENST00000498532 MSH5O43196 834 aa23.85■■□□□ 1.41
HDAC11-220ENST00000498532 HMGB2P26583 209 aaKnown RBP23.85■■□□□ 1.41
HDAC11-220ENST00000498532 NKX1-1Q15270 411 aaPredicted RBP23.84■■□□□ 1.41
HDAC11-220ENST00000498532 KLHL34Q8N239 644 aa23.84■■□□□ 1.41
HDAC11-220ENST00000498532 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
HDAC11-220ENST00000498532 PLEKHG2Q9H7P9 1386 aa23.82■■□□□ 1.4
HDAC11-220ENST00000498532 PIGBQ92521 554 aa23.82■■□□□ 1.4
HDAC11-220ENST00000498532 C4BP0C0L5 1744 aa23.81■■□□□ 1.4
HDAC11-220ENST00000498532 COL23A1Q86Y22 540 aaPredicted RBP23.81■■□□□ 1.4
HDAC11-220ENST00000498532 IFNL2Q8IZJ0 200 aa23.81■■□□□ 1.4
HDAC11-220ENST00000498532 GOLGB1Q14789 3259 aaKnown RBP23.81■■□□□ 1.4
HDAC11-220ENST00000498532 PHKG2P15735 406 aa23.8■■□□□ 1.4
HDAC11-220ENST00000498532 TMOD3Q9NYL9 352 aa23.8■■□□□ 1.4
HDAC11-220ENST00000498532 IGSF1Q8N6C5 1336 aa23.8■■□□□ 1.4
HDAC11-220ENST00000498532 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
HDAC11-220ENST00000498532 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
HDAC11-220ENST00000498532 KNSTRNQ9Y448 316 aa23.78■■□□□ 1.4
HDAC11-220ENST00000498532 AK7Q96M32 723 aa23.77■■□□□ 1.4
HDAC11-220ENST00000498532 MSL1Q68DK7 614 aa23.76■■□□□ 1.39
HDAC11-220ENST00000498532 CHD4Q14839 1912 aa23.76■■□□□ 1.39
HDAC11-220ENST00000498532 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
HDAC11-220ENST00000498532 LOC102724428A0A0B4J2F2 783 aa23.74■■□□□ 1.39
HDAC11-220ENST00000498532 SIK1P57059 783 aa23.74■■□□□ 1.39
HDAC11-220ENST00000498532 GPR162Q16538 588 aa23.74■■□□□ 1.39
HDAC11-220ENST00000498532 ASAP1Q9ULH1 1129 aa23.72■■□□□ 1.39
HDAC11-220ENST00000498532 KIF7Q2M1P5 1343 aa23.72■■□□□ 1.39
HDAC11-220ENST00000498532 PHF14O94880 888 aa23.71■■□□□ 1.39
HDAC11-220ENST00000498532 PLEKHO1Q53GL0 409 aaPredicted RBP23.71■■□□□ 1.39
HDAC11-220ENST00000498532 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
HDAC11-220ENST00000498532 NLGN2Q8NFZ4 835 aa23.71■■□□□ 1.39
HDAC11-220ENST00000498532 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
HDAC11-220ENST00000498532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.69■■□□□ 1.38
HDAC11-220ENST00000498532 AMOTQ4VCS5 1084 aa23.69■■□□□ 1.38
HDAC11-220ENST00000498532 ZNF530Q6P9A1 599 aaPredicted RBP23.69■■□□□ 1.38
HDAC11-220ENST00000498532 LINC00116Q8NCU8 138 aa23.69■■□□□ 1.38
HDAC11-220ENST00000498532 DCAF5Q96JK2 942 aa23.69■■□□□ 1.38
HDAC11-220ENST00000498532 SSFA2P28290 1259 aa23.68■■□□□ 1.38
HDAC11-220ENST00000498532 ATP6V1AP38606 617 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms