RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
THBS3-209ENST00000498500 MSH5O43196 834 aa17.03■□□□□ 0.32
THBS3-209ENST00000498500 GRIN3BO60391 1043 aa17.03■□□□□ 0.32
THBS3-209ENST00000498500 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
THBS3-209ENST00000498500 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
THBS3-209ENST00000498500 IP6K1Q92551 441 aa17.02■□□□□ 0.32
THBS3-209ENST00000498500 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
THBS3-209ENST00000498500 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.31
THBS3-209ENST00000498500 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
THBS3-209ENST00000498500 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
THBS3-209ENST00000498500 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
THBS3-209ENST00000498500 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
THBS3-209ENST00000498500 CCNL1Q9UK58 526 aaPredicted RBP17■□□□□ 0.31
THBS3-209ENST00000498500 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
THBS3-209ENST00000498500 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
THBS3-209ENST00000498500 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
THBS3-209ENST00000498500 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
THBS3-209ENST00000498500 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
THBS3-209ENST00000498500 AMPHP49418 695 aa16.96■□□□□ 0.31
THBS3-209ENST00000498500 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
THBS3-209ENST00000498500 NSD2O96028 1365 aa16.96■□□□□ 0.31
THBS3-209ENST00000498500 USP47Q96K76 1375 aa16.96■□□□□ 0.31
THBS3-209ENST00000498500 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
THBS3-209ENST00000498500 C5P01031 1676 aa16.94■□□□□ 0.3
THBS3-209ENST00000498500 HOXC9P31274 260 aa16.94■□□□□ 0.3
THBS3-209ENST00000498500 COG3Q96JB2 828 aa16.94■□□□□ 0.3
THBS3-209ENST00000498500 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
THBS3-209ENST00000498500 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
THBS3-209ENST00000498500 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
THBS3-209ENST00000498500 MEGF6O75095 1541 aa16.93■□□□□ 0.3
THBS3-209ENST00000498500 FBLN1P23142 703 aa16.92■□□□□ 0.3
THBS3-209ENST00000498500 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
THBS3-209ENST00000498500 ZNF526Q8TF50 670 aaPredicted RBP16.91■□□□□ 0.3
THBS3-209ENST00000498500 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
THBS3-209ENST00000498500 FLAD1Q8NFF5 587 aa16.9■□□□□ 0.3
THBS3-209ENST00000498500 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
THBS3-209ENST00000498500 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.29
THBS3-209ENST00000498500 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
THBS3-209ENST00000498500 HSPA6P17066 643 aa16.88■□□□□ 0.29
THBS3-209ENST00000498500 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
THBS3-209ENST00000498500 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
THBS3-209ENST00000498500 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
THBS3-209ENST00000498500 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
THBS3-209ENST00000498500 ITGB4P16144 1822 aa16.87■□□□□ 0.29
THBS3-209ENST00000498500 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
THBS3-209ENST00000498500 RRS1Q15050 365 aaKnown RBP16.86■□□□□ 0.29
THBS3-209ENST00000498500 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
THBS3-209ENST00000498500 TESK2Q96S53 571 aa16.86■□□□□ 0.29
THBS3-209ENST00000498500 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
THBS3-209ENST00000498500 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
THBS3-209ENST00000498500 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
THBS3-209ENST00000498500 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
THBS3-209ENST00000498500 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
THBS3-209ENST00000498500 AK7Q96M32 723 aa16.85■□□□□ 0.29
THBS3-209ENST00000498500 ADCY9O60503 1353 aa16.85■□□□□ 0.29
THBS3-209ENST00000498500 UBR3Q6ZT12 1888 aa16.84■□□□□ 0.29
THBS3-209ENST00000498500 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
THBS3-209ENST00000498500 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
THBS3-209ENST00000498500 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
THBS3-209ENST00000498500 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
THBS3-209ENST00000498500 PHF14O94880 888 aa16.83■□□□□ 0.28
THBS3-209ENST00000498500 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
THBS3-209ENST00000498500 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
THBS3-209ENST00000498500 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
THBS3-209ENST00000498500 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
THBS3-209ENST00000498500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
THBS3-209ENST00000498500 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 FYB1O15117 783 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 HSP90AB2PQ58FF8 381 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 KIF20BQ96Q89 1820 aa16.79■□□□□ 0.28
THBS3-209ENST00000498500 CYP27B1O15528 508 aa16.78■□□□□ 0.28
THBS3-209ENST00000498500 INSRP06213 1382 aa16.77■□□□□ 0.28
THBS3-209ENST00000498500 KIF3CO14782 793 aa16.77■□□□□ 0.28
THBS3-209ENST00000498500 FLT4P35916 1363 aa16.77■□□□□ 0.27
THBS3-209ENST00000498500 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
THBS3-209ENST00000498500 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
THBS3-209ENST00000498500 SSFA2P28290 1259 aa16.76■□□□□ 0.27
THBS3-209ENST00000498500 PIGBQ92521 554 aa16.76■□□□□ 0.27
THBS3-209ENST00000498500 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
THBS3-209ENST00000498500 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
THBS3-209ENST00000498500 SIK1P57059 783 aa16.74■□□□□ 0.27
THBS3-209ENST00000498500 LINC00116Q8NCU8 138 aa16.74■□□□□ 0.27
THBS3-209ENST00000498500 APLP1P51693 650 aa16.73■□□□□ 0.27
THBS3-209ENST00000498500 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
THBS3-209ENST00000498500 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
THBS3-209ENST00000498500 CICQ96RK0 1608 aaPredicted RBP16.72■□□□□ 0.27
THBS3-209ENST00000498500 GNPATO15228 680 aa16.72■□□□□ 0.27
THBS3-209ENST00000498500 TMOD3Q9NYL9 352 aa16.72■□□□□ 0.27
THBS3-209ENST00000498500 SPG7Q9UQ90 795 aa16.72■□□□□ 0.27
THBS3-209ENST00000498500 TOMM70O94826 608 aa16.71■□□□□ 0.27
THBS3-209ENST00000498500 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
THBS3-209ENST00000498500 TMF1P82094 1093 aa16.71■□□□□ 0.27
THBS3-209ENST00000498500 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
THBS3-209ENST00000498500 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
THBS3-209ENST00000498500 MMP10P09238 476 aa16.7■□□□□ 0.26
THBS3-209ENST00000498500 BCS1LQ9Y276 419 aa16.7■□□□□ 0.26
THBS3-209ENST00000498500 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms