RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
PBX1-211ENST00000498497 SCP2P22307 547 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 TCP11L2Q8N4U5 519 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 REC8O95072 547 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 MAP2K2P36507 400 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 CACTINQ8WUQ7 758 aaKnown RBP13.86□□□□□ -0.19
PBX1-211ENST00000498497 GPS2Q13227 327 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
PBX1-211ENST00000498497 FHOD1Q9Y613 1164 aa13.86□□□□□ -0.19
PBX1-211ENST00000498497 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
PBX1-211ENST00000498497 A0A087WWV3 80 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 CDC45O75419 566 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 FAM184AQ8NB25 1140 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
PBX1-211ENST00000498497 PLEKHH2Q8IVE3 1493 aa13.85□□□□□ -0.19
PBX1-211ENST00000498497 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
PBX1-211ENST00000498497 FRMD3A2A2Y4 597 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 TMF1P82094 1093 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
PBX1-211ENST00000498497 CCDC183Q5T5S1 534 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 MICALL1Q8N3F8 863 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 NUCB1Q02818 461 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 LRCH2Q5VUJ6 765 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 ZSCAN25Q6NSZ9 544 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 ZSWIM4Q9H7M6 989 aa13.84□□□□□ -0.19
PBX1-211ENST00000498497 SATB1Q01826 763 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 FBLN2P98095 1184 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 CLIP2Q9UDT6 1046 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
PBX1-211ENST00000498497 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
PBX1-211ENST00000498497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
PBX1-211ENST00000498497 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
PBX1-211ENST00000498497 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
PBX1-211ENST00000498497 TPM4P67936 248 aa13.82□□□□□ -0.2
PBX1-211ENST00000498497 ARMC3Q5W041 872 aa13.82□□□□□ -0.2
PBX1-211ENST00000498497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
PBX1-211ENST00000498497 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 CCDC91Q7Z6B0 441 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
PBX1-211ENST00000498497 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
PBX1-211ENST00000498497 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
PBX1-211ENST00000498497 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 LEKR1Q6ZMV7 388 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 EIF3CQ99613 913 aaKnown RBP13.81□□□□□ -0.2
PBX1-211ENST00000498497 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 KDM5CP41229 1560 aa13.81□□□□□ -0.2
PBX1-211ENST00000498497 HSP90AB3PQ58FF7 597 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 RAI14Q9P0K7 980 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 VPS18Q9P253 973 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 NEBLO76041 1014 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 UVSSAQ2YD98 709 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
PBX1-211ENST00000498497 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
PBX1-211ENST00000498497 SKILP12757 684 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 MX1P20591 662 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 MCM6Q14566 821 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 FERMT3Q86UX7 667 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 KIRREL3Q8IZU9 778 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 IGF1RP08069 1367 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 PTPRCP08575 1304 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 DONSONQ9NYP3 566 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 LIG3P49916 1009 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 SMC1AQ14683 1233 aaKnown RBP13.79□□□□□ -0.2
PBX1-211ENST00000498497 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
PBX1-211ENST00000498497 ERO1AQ96HE7 468 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 SRCIN1Q9C0H9 1055 aa13.79□□□□□ -0.2
PBX1-211ENST00000498497 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
PBX1-211ENST00000498497 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
PBX1-211ENST00000498497 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
PBX1-211ENST00000498497 UBXN4Q92575 508 aa13.78□□□□□ -0.2
PBX1-211ENST00000498497 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
PBX1-211ENST00000498497 ANO6Q4KMQ2 910 aa13.78□□□□□ -0.2
PBX1-211ENST00000498497 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
PBX1-211ENST00000498497 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
PBX1-211ENST00000498497 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.2
PBX1-211ENST00000498497 ZNF853P0CG23 659 aa13.77□□□□□ -0.2
PBX1-211ENST00000498497 HDAC1Q13547 482 aaPredicted RBP13.77□□□□□ -0.2
PBX1-211ENST00000498497 MNS1Q8NEH6 495 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms