RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
CCDC58-207ENST00000498466 ANKRD36BQ8N2N9 1353 aa19.76■□□□□ 0.75
CCDC58-207ENST00000498466 QSER1Q2KHR3 1735 aa19.75■□□□□ 0.75
CCDC58-207ENST00000498466 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
CCDC58-207ENST00000498466 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
CCDC58-207ENST00000498466 NSD2O96028 1365 aa19.72■□□□□ 0.75
CCDC58-207ENST00000498466 CEP350Q5VT06 3117 aa19.72■□□□□ 0.75
CCDC58-207ENST00000498466 FAM208AQ9UK61 1670 aaKnown RBP19.72■□□□□ 0.75
CCDC58-207ENST00000498466 AMPHP49418 695 aa19.72■□□□□ 0.75
CCDC58-207ENST00000498466 COG3Q96JB2 828 aa19.72■□□□□ 0.75
CCDC58-207ENST00000498466 MAP3K19Q56UN5 1328 aa19.72■□□□□ 0.75
CCDC58-207ENST00000498466 COL24A1Q17RW2 1714 aa19.71■□□□□ 0.75
CCDC58-207ENST00000498466 HOXC9P31274 260 aa19.71■□□□□ 0.75
CCDC58-207ENST00000498466 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
CCDC58-207ENST00000498466 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
CCDC58-207ENST00000498466 PUS7Q96PZ0 661 aaKnown RBP19.7■□□□□ 0.74
CCDC58-207ENST00000498466 USP47Q96K76 1375 aa19.7■□□□□ 0.74
CCDC58-207ENST00000498466 TUBGCP6Q96RT7 1819 aa19.69■□□□□ 0.74
CCDC58-207ENST00000498466 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCDC58-207ENST00000498466 FBLN1P23142 703 aa19.69■□□□□ 0.74
CCDC58-207ENST00000498466 MEGF6O75095 1541 aa19.68■□□□□ 0.74
CCDC58-207ENST00000498466 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
CCDC58-207ENST00000498466 LY75O60449 1722 aa19.68■□□□□ 0.74
CCDC58-207ENST00000498466 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
CCDC58-207ENST00000498466 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
CCDC58-207ENST00000498466 NBPF6Q5VWK0 638 aa19.64■□□□□ 0.73
CCDC58-207ENST00000498466 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
CCDC58-207ENST00000498466 RAPGEF4Q8WZA2 1011 aa19.64■□□□□ 0.73
CCDC58-207ENST00000498466 NBPF4Q96M43 638 aa19.64■□□□□ 0.73
CCDC58-207ENST00000498466 RTL1A6NKG5 1358 aa19.63■□□□□ 0.73
CCDC58-207ENST00000498466 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
CCDC58-207ENST00000498466 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
CCDC58-207ENST00000498466 IFFO2Q5TF58 517 aa19.62■□□□□ 0.73
CCDC58-207ENST00000498466 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
CCDC58-207ENST00000498466 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
CCDC58-207ENST00000498466 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
CCDC58-207ENST00000498466 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
CCDC58-207ENST00000498466 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
CCDC58-207ENST00000498466 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
CCDC58-207ENST00000498466 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
CCDC58-207ENST00000498466 HMGB2P26583 209 aaKnown RBP19.6■□□□□ 0.73
CCDC58-207ENST00000498466 FLAD1Q8NFF5 587 aa19.6■□□□□ 0.73
CCDC58-207ENST00000498466 TESK2Q96S53 571 aa19.6■□□□□ 0.73
CCDC58-207ENST00000498466 PALLDQ8WX93 1383 aa19.58■□□□□ 0.73
CCDC58-207ENST00000498466 PCDH11XQ9BZA7 1347 aa19.58■□□□□ 0.73
CCDC58-207ENST00000498466 PCDH11YQ9BZA8 1340 aa19.58■□□□□ 0.73
CCDC58-207ENST00000498466 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.72
CCDC58-207ENST00000498466 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
CCDC58-207ENST00000498466 GPBP1L1Q9HC44 474 aaPredicted RBP19.58■□□□□ 0.72
CCDC58-207ENST00000498466 C5P01031 1676 aa19.57■□□□□ 0.72
CCDC58-207ENST00000498466 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
CCDC58-207ENST00000498466 FYB1O15117 783 aa19.56■□□□□ 0.72
CCDC58-207ENST00000498466 ZNF526Q8TF50 670 aaPredicted RBP19.55■□□□□ 0.72
CCDC58-207ENST00000498466 AK7Q96M32 723 aa19.55■□□□□ 0.72
CCDC58-207ENST00000498466 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
CCDC58-207ENST00000498466 PHF14O94880 888 aa19.53■□□□□ 0.72
CCDC58-207ENST00000498466 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
CCDC58-207ENST00000498466 INSRP06213 1382 aa19.53■□□□□ 0.72
CCDC58-207ENST00000498466 CYP27B1O15528 508 aa19.52■□□□□ 0.72
CCDC58-207ENST00000498466 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
CCDC58-207ENST00000498466 AMIGO3Q86WK7 504 aa19.51■□□□□ 0.71
CCDC58-207ENST00000498466 ADCY9O60503 1353 aa19.51■□□□□ 0.71
CCDC58-207ENST00000498466 FLT4P35916 1363 aa19.51■□□□□ 0.71
CCDC58-207ENST00000498466 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
CCDC58-207ENST00000498466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
CCDC58-207ENST00000498466 HSPA6P17066 643 aa19.5■□□□□ 0.71
CCDC58-207ENST00000498466 C4BP0C0L5 1744 aa19.5■□□□□ 0.71
CCDC58-207ENST00000498466 TMF1P82094 1093 aa19.49■□□□□ 0.71
CCDC58-207ENST00000498466 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
CCDC58-207ENST00000498466 NSD3Q9BZ95 1437 aa19.49■□□□□ 0.71
CCDC58-207ENST00000498466 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
CCDC58-207ENST00000498466 PIGBQ92521 554 aa19.48■□□□□ 0.71
CCDC58-207ENST00000498466 KIF24Q5T7B8 1368 aa19.47■□□□□ 0.71
CCDC58-207ENST00000498466 SSFA2P28290 1259 aa19.46■□□□□ 0.71
CCDC58-207ENST00000498466 TOGARAM1Q9Y4F4 1720 aa19.45■□□□□ 0.7
CCDC58-207ENST00000498466 LOC102724428A0A0B4J2F2 783 aa19.45■□□□□ 0.7
CCDC58-207ENST00000498466 SIK1P57059 783 aa19.45■□□□□ 0.7
CCDC58-207ENST00000498466 LINC00116Q8NCU8 138 aa19.45■□□□□ 0.7
CCDC58-207ENST00000498466 PPM1GO15355 546 aaPredicted RBP19.44■□□□□ 0.7
CCDC58-207ENST00000498466 SPG7Q9UQ90 795 aa19.44■□□□□ 0.7
CCDC58-207ENST00000498466 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
CCDC58-207ENST00000498466 NKX1-1Q15270 411 aaPredicted RBP19.43■□□□□ 0.7
CCDC58-207ENST00000498466 TMOD3Q9NYL9 352 aa19.43■□□□□ 0.7
CCDC58-207ENST00000498466 ITGB4P16144 1822 aa19.42■□□□□ 0.7
CCDC58-207ENST00000498466 UBR3Q6ZT12 1888 aa19.42■□□□□ 0.7
CCDC58-207ENST00000498466 GNPATO15228 680 aa19.42■□□□□ 0.7
CCDC58-207ENST00000498466 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
CCDC58-207ENST00000498466 CDCA8Q53HL2 280 aa19.41■□□□□ 0.7
CCDC58-207ENST00000498466 PKD1L3Q7Z443 1732 aa19.41■□□□□ 0.7
CCDC58-207ENST00000498466 KIF3CO14782 793 aa19.4■□□□□ 0.7
CCDC58-207ENST00000498466 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
CCDC58-207ENST00000498466 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
CCDC58-207ENST00000498466 MMP10P09238 476 aa19.39■□□□□ 0.69
CCDC58-207ENST00000498466 ITPK1Q13572 414 aa19.39■□□□□ 0.69
CCDC58-207ENST00000498466 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
CCDC58-207ENST00000498466 CARD14Q9BXL6 1004 aa19.38■□□□□ 0.69
CCDC58-207ENST00000498466 IFNL2Q8IZJ0 200 aa19.37■□□□□ 0.69
CCDC58-207ENST00000498466 EYA1Q99502 592 aa19.37■□□□□ 0.69
CCDC58-207ENST00000498466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCDC58-207ENST00000498466 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms