RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 TXNRD1Q16881 649 aa13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 AMER1Q5JTC6 1135 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 CRB1P82279 1406 aa13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 PPM1GO15355 546 aaPredicted RBP13.63□□□□□ -0.23
TSPAN1-209ENST00000498443 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
TSPAN1-209ENST00000498443 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
TSPAN1-209ENST00000498443 ARXQ96QS3 562 aa13.63□□□□□ -0.23
TSPAN1-209ENST00000498443 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
TSPAN1-209ENST00000498443 HOXC9P31274 260 aa13.62□□□□□ -0.23
TSPAN1-209ENST00000498443 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
TSPAN1-209ENST00000498443 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
TSPAN1-209ENST00000498443 LTN1O94822 1766 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 CSB-PGBD3P0DP91 1061 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 AMPHP49418 695 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 IP6K1Q92551 441 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
TSPAN1-209ENST00000498443 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
TSPAN1-209ENST00000498443 NLRP2Q9NX02 1062 aa13.59□□□□□ -0.23
TSPAN1-209ENST00000498443 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
TSPAN1-209ENST00000498443 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
TSPAN1-209ENST00000498443 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
TSPAN1-209ENST00000498443 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.24
TSPAN1-209ENST00000498443 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 ERBB3P21860 1342 aa13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
TSPAN1-209ENST00000498443 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
TSPAN1-209ENST00000498443 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
TSPAN1-209ENST00000498443 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
TSPAN1-209ENST00000498443 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN1-209ENST00000498443 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
TSPAN1-209ENST00000498443 EXOC5O00471 708 aa13.53□□□□□ -0.24
TSPAN1-209ENST00000498443 FKBP8Q14318 412 aa13.53□□□□□ -0.24
TSPAN1-209ENST00000498443 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
TSPAN1-209ENST00000498443 POLD1P28340 1107 aa13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 MTHFSP49914 203 aa13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 EIF4A2Q14240 407 aaKnown RBP13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
TSPAN1-209ENST00000498443 ANKRD26Q9UPS8 1709 aa13.51□□□□□ -0.25
TSPAN1-209ENST00000498443 EYA1Q99502 592 aa13.51□□□□□ -0.25
TSPAN1-209ENST00000498443 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
TSPAN1-209ENST00000498443 INSRP06213 1382 aa13.5□□□□□ -0.25
TSPAN1-209ENST00000498443 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
TSPAN1-209ENST00000498443 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
TSPAN1-209ENST00000498443 GOLGB1Q14789 3259 aaKnown RBP13.5□□□□□ -0.25
TSPAN1-209ENST00000498443 FLT4P35916 1363 aa13.49□□□□□ -0.25
TSPAN1-209ENST00000498443 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
TSPAN1-209ENST00000498443 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
TSPAN1-209ENST00000498443 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
TSPAN1-209ENST00000498443 BCL9O00512 1426 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 NSD2O96028 1365 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 MSH5O43196 834 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 IL2RBP14784 551 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 MEGF6O75095 1541 aa13.47□□□□□ -0.25
TSPAN1-209ENST00000498443 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 BTAF1O14981 1849 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 IL13P35225 146 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 KCNQ4P56696 695 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 RALBP1Q15311 655 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
TSPAN1-209ENST00000498443 TNS2Q63HR2 1409 aa13.46□□□□□ -0.26
TSPAN1-209ENST00000498443 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
TSPAN1-209ENST00000498443 ABCC6O95255 1503 aa13.44□□□□□ -0.26
TSPAN1-209ENST00000498443 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
TSPAN1-209ENST00000498443 HMOX1P09601 288 aa13.44□□□□□ -0.26
TSPAN1-209ENST00000498443 HSPA6P17066 643 aa13.44□□□□□ -0.26
TSPAN1-209ENST00000498443 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
TSPAN1-209ENST00000498443 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
TSPAN1-209ENST00000498443 SMG6Q86US8 1419 aaKnown RBP13.43□□□□□ -0.26
TSPAN1-209ENST00000498443 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
TSPAN1-209ENST00000498443 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
TSPAN1-209ENST00000498443 CAPN15O75808 1086 aa13.42□□□□□ -0.26
TSPAN1-209ENST00000498443 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
TSPAN1-209ENST00000498443 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
TSPAN1-209ENST00000498443 SLC16A10Q8TF71 515 aa13.42□□□□□ -0.26
TSPAN1-209ENST00000498443 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
TSPAN1-209ENST00000498443 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
TSPAN1-209ENST00000498443 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
TSPAN1-209ENST00000498443 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
TSPAN1-209ENST00000498443 TUBGCP6Q96RT7 1819 aa13.41□□□□□ -0.26
TSPAN1-209ENST00000498443 IGSF1Q8N6C5 1336 aa13.4□□□□□ -0.26
TSPAN1-209ENST00000498443 CYP27B1O15528 508 aa13.4□□□□□ -0.26
TSPAN1-209ENST00000498443 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
TSPAN1-209ENST00000498443 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms