RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
MUC1-220ENST00000498431 MEGF6O75095 1541 aa22.72■■□□□ 1.23
MUC1-220ENST00000498431 COG3Q96JB2 828 aa22.71■■□□□ 1.23
MUC1-220ENST00000498431 ANKRD36BQ8N2N9 1353 aa22.71■■□□□ 1.23
MUC1-220ENST00000498431 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
MUC1-220ENST00000498431 KLHL34Q8N239 644 aa22.7■■□□□ 1.22
MUC1-220ENST00000498431 SLC16A10Q8TF71 515 aa22.7■■□□□ 1.22
MUC1-220ENST00000498431 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
MUC1-220ENST00000498431 AMPHP49418 695 aa22.69■■□□□ 1.22
MUC1-220ENST00000498431 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
MUC1-220ENST00000498431 GPR162Q16538 588 aa22.68■■□□□ 1.22
MUC1-220ENST00000498431 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
MUC1-220ENST00000498431 POLD1P28340 1107 aa22.66■■□□□ 1.22
MUC1-220ENST00000498431 RRS1Q15050 365 aaKnown RBP22.65■■□□□ 1.22
MUC1-220ENST00000498431 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
MUC1-220ENST00000498431 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
MUC1-220ENST00000498431 USHBP1Q8N6Y0 703 aa22.64■■□□□ 1.21
MUC1-220ENST00000498431 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
MUC1-220ENST00000498431 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
MUC1-220ENST00000498431 CCNL1Q9UK58 526 aaPredicted RBP22.63■■□□□ 1.21
MUC1-220ENST00000498431 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
MUC1-220ENST00000498431 C1QTNF8P60827 252 aa22.62■■□□□ 1.21
MUC1-220ENST00000498431 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
MUC1-220ENST00000498431 SENP3-EIF4A1A0A087X0R7 540 aa22.6■■□□□ 1.21
MUC1-220ENST00000498431 FYB1O15117 783 aa22.6■■□□□ 1.21
MUC1-220ENST00000498431 COL23A1Q86Y22 540 aaPredicted RBP22.6■■□□□ 1.21
MUC1-220ENST00000498431 USP47Q96K76 1375 aa22.59■■□□□ 1.21
MUC1-220ENST00000498431 CEP350Q5VT06 3117 aa22.57■■□□□ 1.2
MUC1-220ENST00000498431 MSH5O43196 834 aa22.57■■□□□ 1.2
MUC1-220ENST00000498431 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
MUC1-220ENST00000498431 C5P01031 1676 aa22.57■■□□□ 1.2
MUC1-220ENST00000498431 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
MUC1-220ENST00000498431 HSP90AB2PQ58FF8 381 aa22.55■■□□□ 1.2
MUC1-220ENST00000498431 RAPGEF4Q8WZA2 1011 aa22.55■■□□□ 1.2
MUC1-220ENST00000498431 SMG6Q86US8 1419 aaKnown RBP22.55■■□□□ 1.2
MUC1-220ENST00000498431 CGNL1Q0VF96 1302 aa22.55■■□□□ 1.2
MUC1-220ENST00000498431 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
MUC1-220ENST00000498431 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
MUC1-220ENST00000498431 TOGARAM1Q9Y4F4 1720 aa22.54■■□□□ 1.2
MUC1-220ENST00000498431 TATP17735 454 aaPredicted RBP22.53■■□□□ 1.2
MUC1-220ENST00000498431 INSRP06213 1382 aa22.52■■□□□ 1.2
MUC1-220ENST00000498431 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
MUC1-220ENST00000498431 GIGYF1O75420 1035 aaPredicted RBP22.51■■□□□ 1.19
MUC1-220ENST00000498431 PCDH11XQ9BZA7 1347 aa22.51■■□□□ 1.19
MUC1-220ENST00000498431 PCDH11YQ9BZA8 1340 aa22.51■■□□□ 1.19
MUC1-220ENST00000498431 FLT4P35916 1363 aa22.5■■□□□ 1.19
MUC1-220ENST00000498431 PALLDQ8WX93 1383 aa22.5■■□□□ 1.19
MUC1-220ENST00000498431 CYP27B1O15528 508 aa22.5■■□□□ 1.19
MUC1-220ENST00000498431 TMF1P82094 1093 aa22.5■■□□□ 1.19
MUC1-220ENST00000498431 ITGB4P16144 1822 aa22.5■■□□□ 1.19
MUC1-220ENST00000498431 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
MUC1-220ENST00000498431 AMIGO3Q86WK7 504 aa22.48■■□□□ 1.19
MUC1-220ENST00000498431 C4BP0C0L5 1744 aa22.48■■□□□ 1.19
MUC1-220ENST00000498431 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
MUC1-220ENST00000498431 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
MUC1-220ENST00000498431 GRIN3BO60391 1043 aa22.46■■□□□ 1.19
MUC1-220ENST00000498431 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
MUC1-220ENST00000498431 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
MUC1-220ENST00000498431 KIF24Q5T7B8 1368 aa22.45■■□□□ 1.18
MUC1-220ENST00000498431 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
MUC1-220ENST00000498431 CD2APQ9Y5K6 639 aa22.43■■□□□ 1.18
MUC1-220ENST00000498431 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
MUC1-220ENST00000498431 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
MUC1-220ENST00000498431 FLAD1Q8NFF5 587 aa22.42■■□□□ 1.18
MUC1-220ENST00000498431 PIGBQ92521 554 aa22.42■■□□□ 1.18
MUC1-220ENST00000498431 ATP10DQ9P241 1426 aa22.41■■□□□ 1.18
MUC1-220ENST00000498431 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
MUC1-220ENST00000498431 ANKRD26Q9UPS8 1709 aa22.41■■□□□ 1.18
MUC1-220ENST00000498431 PHF14O94880 888 aa22.4■■□□□ 1.18
MUC1-220ENST00000498431 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
MUC1-220ENST00000498431 AK7Q96M32 723 aa22.4■■□□□ 1.18
MUC1-220ENST00000498431 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
MUC1-220ENST00000498431 NKX1-1Q15270 411 aaPredicted RBP22.38■■□□□ 1.17
MUC1-220ENST00000498431 CDCA8Q53HL2 280 aa22.38■■□□□ 1.17
MUC1-220ENST00000498431 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
MUC1-220ENST00000498431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.37■■□□□ 1.17
MUC1-220ENST00000498431 LINC00116Q8NCU8 138 aa22.37■■□□□ 1.17
MUC1-220ENST00000498431 ADCY9O60503 1353 aa22.36■■□□□ 1.17
MUC1-220ENST00000498431 LOC102724428A0A0B4J2F2 783 aa22.35■■□□□ 1.17
MUC1-220ENST00000498431 HMGB2P26583 209 aaKnown RBP22.35■■□□□ 1.17
MUC1-220ENST00000498431 SIK1P57059 783 aa22.35■■□□□ 1.17
MUC1-220ENST00000498431 EYA1Q99502 592 aa22.35■■□□□ 1.17
MUC1-220ENST00000498431 SPG7Q9UQ90 795 aa22.35■■□□□ 1.17
MUC1-220ENST00000498431 IGSF1Q8N6C5 1336 aa22.34■■□□□ 1.17
MUC1-220ENST00000498431 ASAP1Q9ULH1 1129 aa22.34■■□□□ 1.17
MUC1-220ENST00000498431 WASHC2AQ641Q2 1341 aa22.33■■□□□ 1.17
MUC1-220ENST00000498431 ITPK1Q13572 414 aa22.33■■□□□ 1.17
MUC1-220ENST00000498431 SSFA2P28290 1259 aa22.32■■□□□ 1.16
MUC1-220ENST00000498431 ZNF526Q8TF50 670 aaPredicted RBP22.32■■□□□ 1.16
MUC1-220ENST00000498431 TMOD3Q9NYL9 352 aa22.32■■□□□ 1.16
MUC1-220ENST00000498431 GPBP1L1Q9HC44 474 aaPredicted RBP22.31■■□□□ 1.16
MUC1-220ENST00000498431 PHKG2P15735 406 aa22.3■■□□□ 1.16
MUC1-220ENST00000498431 POLKQ9UBT6 870 aa22.3■■□□□ 1.16
MUC1-220ENST00000498431 GNPATO15228 680 aa22.29■■□□□ 1.16
MUC1-220ENST00000498431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.29■■□□□ 1.16
MUC1-220ENST00000498431 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
MUC1-220ENST00000498431 ATG3Q9NT62 314 aa22.28■■□□□ 1.16
MUC1-220ENST00000498431 IFNL2Q8IZJ0 200 aa22.27■■□□□ 1.16
MUC1-220ENST00000498431 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
MUC1-220ENST00000498431 KIAA1551Q9HCM1 1747 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms