RNA–Protein interactions for RNA: ENST00000498274.5

PCNP-207, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-207ENST00000498274 MEGF6O75095 1541 aa25.91■■□□□ 1.74
PCNP-207ENST00000498274 USP47Q96K76 1375 aa25.91■■□□□ 1.74
PCNP-207ENST00000498274 SLC27A3Q5K4L6 730 aa25.9■■□□□ 1.74
PCNP-207ENST00000498274 TFCP2L1Q9NZI6 479 aa25.88■■□□□ 1.73
PCNP-207ENST00000498274 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
PCNP-207ENST00000498274 FAM208AQ9UK61 1670 aaKnown RBP25.87■■□□□ 1.73
PCNP-207ENST00000498274 NSD2O96028 1365 aa25.86■■□□□ 1.73
PCNP-207ENST00000498274 RTL1A6NKG5 1358 aa25.85■■□□□ 1.73
PCNP-207ENST00000498274 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
PCNP-207ENST00000498274 RGPD2P0DJD1 1756 aa25.84■■□□□ 1.73
PCNP-207ENST00000498274 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
PCNP-207ENST00000498274 CCNL1Q9UK58 526 aaPredicted RBP25.84■■□□□ 1.73
PCNP-207ENST00000498274 UTRNP46939 3433 aa25.84■■□□□ 1.73
PCNP-207ENST00000498274 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
PCNP-207ENST00000498274 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.72
PCNP-207ENST00000498274 TATP17735 454 aaPredicted RBP25.82■■□□□ 1.72
PCNP-207ENST00000498274 POLD1P28340 1107 aa25.82■■□□□ 1.72
PCNP-207ENST00000498274 SMG6Q86US8 1419 aaKnown RBP25.81■■□□□ 1.72
PCNP-207ENST00000498274 MSH5O43196 834 aa25.81■■□□□ 1.72
PCNP-207ENST00000498274 ZNF784Q8NCA9 323 aaPredicted RBP25.81■■□□□ 1.72
PCNP-207ENST00000498274 SLC16A10Q8TF71 515 aa25.81■■□□□ 1.72
PCNP-207ENST00000498274 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
PCNP-207ENST00000498274 GPR162Q16538 588 aa25.79■■□□□ 1.72
PCNP-207ENST00000498274 CARD14Q9BXL6 1004 aa25.79■■□□□ 1.72
PCNP-207ENST00000498274 SHANK3Q9BYB0 1731 aa25.78■■□□□ 1.72
PCNP-207ENST00000498274 CDCA8Q53HL2 280 aa25.78■■□□□ 1.72
PCNP-207ENST00000498274 INSRP06213 1382 aa25.78■■□□□ 1.72
PCNP-207ENST00000498274 EMILIN1Q9Y6C2 1016 aa25.77■■□□□ 1.72
PCNP-207ENST00000498274 MAP3K5Q99683 1374 aa25.77■■□□□ 1.72
PCNP-207ENST00000498274 PPM1GO15355 546 aaPredicted RBP25.76■■□□□ 1.71
PCNP-207ENST00000498274 CGNL1Q0VF96 1302 aa25.76■■□□□ 1.71
PCNP-207ENST00000498274 FLT4P35916 1363 aa25.76■■□□□ 1.71
PCNP-207ENST00000498274 NSD3Q9BZ95 1437 aa25.75■■□□□ 1.71
PCNP-207ENST00000498274 MSL1Q68DK7 614 aa25.74■■□□□ 1.71
PCNP-207ENST00000498274 MPRIPQ6WCQ1 1025 aa25.74■■□□□ 1.71
PCNP-207ENST00000498274 COL23A1Q86Y22 540 aaPredicted RBP25.74■■□□□ 1.71
PCNP-207ENST00000498274 NLGN2Q8NFZ4 835 aa25.74■■□□□ 1.71
PCNP-207ENST00000498274 PCDH11XQ9BZA7 1347 aa25.73■■□□□ 1.71
PCNP-207ENST00000498274 PCDH11YQ9BZA8 1340 aa25.73■■□□□ 1.71
PCNP-207ENST00000498274 CYP27B1O15528 508 aa25.72■■□□□ 1.71
PCNP-207ENST00000498274 POLR3GLQ9BT43 218 aa25.71■■□□□ 1.71
PCNP-207ENST00000498274 LY75O60449 1722 aa25.71■■□□□ 1.71
PCNP-207ENST00000498274 TUBGCP6Q96RT7 1819 aa25.7■■□□□ 1.71
PCNP-207ENST00000498274 KIF20BQ96Q89 1820 aa25.69■■□□□ 1.7
PCNP-207ENST00000498274 PALLDQ8WX93 1383 aa25.69■■□□□ 1.7
PCNP-207ENST00000498274 QSER1Q2KHR3 1735 aa25.68■■□□□ 1.7
PCNP-207ENST00000498274 KIF24Q5T7B8 1368 aa25.67■■□□□ 1.7
PCNP-207ENST00000498274 SMIM5Q71RC9 77 aa25.65■■□□□ 1.7
PCNP-207ENST00000498274 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
PCNP-207ENST00000498274 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
PCNP-207ENST00000498274 PIGBQ92521 554 aa25.63■■□□□ 1.69
PCNP-207ENST00000498274 EYA1Q99502 592 aa25.62■■□□□ 1.69
PCNP-207ENST00000498274 PHF14O94880 888 aa25.61■■□□□ 1.69
PCNP-207ENST00000498274 YBX3P16989 372 aaKnown RBP eCLIP25.61■■□□□ 1.693e-8■□□□□ 10.5
PCNP-207ENST00000498274 SPG7Q9UQ90 795 aa25.61■■□□□ 1.69
PCNP-207ENST00000498274 COL24A1Q17RW2 1714 aa25.6■■□□□ 1.69
PCNP-207ENST00000498274 AMIGO3Q86WK7 504 aa25.6■■□□□ 1.69
PCNP-207ENST00000498274 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
PCNP-207ENST00000498274 AK7Q96M32 723 aa25.6■■□□□ 1.69
PCNP-207ENST00000498274 WASHC2AQ641Q2 1341 aa25.6■■□□□ 1.69
PCNP-207ENST00000498274 POLKQ9UBT6 870 aa25.59■■□□□ 1.69
PCNP-207ENST00000498274 C5P01031 1676 aa25.58■■□□□ 1.68
PCNP-207ENST00000498274 TOGARAM1Q9Y4F4 1720 aa25.57■■□□□ 1.68
PCNP-207ENST00000498274 CHD4Q14839 1912 aa25.57■■□□□ 1.68
PCNP-207ENST00000498274 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
PCNP-207ENST00000498274 GOLGB1Q14789 3259 aaKnown RBP25.57■■□□□ 1.68
PCNP-207ENST00000498274 SENP3-EIF4A1A0A087X0R7 540 aa25.56■■□□□ 1.68
PCNP-207ENST00000498274 C1QTNF8P60827 252 aa25.56■■□□□ 1.68
PCNP-207ENST00000498274 NKX1-1Q15270 411 aaPredicted RBP25.56■■□□□ 1.68
PCNP-207ENST00000498274 TIMELESSQ9UNS1 1208 aa25.56■■□□□ 1.68
PCNP-207ENST00000498274 NCAPD2Q15021 1401 aa25.55■■□□□ 1.68
PCNP-207ENST00000498274 EIF4A2Q14240 407 aaKnown RBP25.54■■□□□ 1.68
PCNP-207ENST00000498274 TMOD3Q9NYL9 352 aa25.54■■□□□ 1.68
PCNP-207ENST00000498274 WWC3Q9ULE0 1092 aa25.54■■□□□ 1.68
PCNP-207ENST00000498274 ASAP1Q9ULH1 1129 aa25.54■■□□□ 1.68
PCNP-207ENST00000498274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.53■■□□□ 1.68
PCNP-207ENST00000498274 LOC102724428A0A0B4J2F2 783 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 GRIN3BO60391 1043 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 PHKG2P15735 406 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 SIK1P57059 783 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 LINC00116Q8NCU8 138 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 PKD1L3Q7Z443 1732 aa25.53■■□□□ 1.68
PCNP-207ENST00000498274 IFNL2Q8IZJ0 200 aa25.52■■□□□ 1.68
PCNP-207ENST00000498274 HMGB2P26583 209 aaKnown RBP25.51■■□□□ 1.67
PCNP-207ENST00000498274 C4BP0C0L5 1744 aa25.51■■□□□ 1.67
PCNP-207ENST00000498274 GIGYF1O75420 1035 aaPredicted RBP25.5■■□□□ 1.67
PCNP-207ENST00000498274 ITPK1Q13572 414 aa25.5■■□□□ 1.67
PCNP-207ENST00000498274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.5■■□□□ 1.679e-8■□□□□ 10.5
PCNP-207ENST00000498274 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
PCNP-207ENST00000498274 ITGB4P16144 1822 aa25.49■■□□□ 1.67
PCNP-207ENST00000498274 ATP6V1AP38606 617 aa25.49■■□□□ 1.67
PCNP-207ENST00000498274 HSPA5P11021 654 aaKnown RBP25.48■■□□□ 1.67
PCNP-207ENST00000498274 TAF1LQ8IZX4 1826 aa25.48■■□□□ 1.67
PCNP-207ENST00000498274 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
PCNP-207ENST00000498274 GNPATO15228 680 aa25.47■■□□□ 1.67
PCNP-207ENST00000498274 PANK3Q9H999 370 aa25.47■■□□□ 1.67
PCNP-207ENST00000498274 ATG3Q9NT62 314 aa25.47■■□□□ 1.67
PCNP-207ENST00000498274 MAP2P11137 1827 aaKnown RBP25.46■■□□□ 1.67
PCNP-207ENST00000498274 SSFA2P28290 1259 aa25.45■■□□□ 1.66
PCNP-207ENST00000498274 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.664e-6■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms