RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-215ENST00000498160 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
CTDSP1-215ENST00000498160 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
CTDSP1-215ENST00000498160 AEBP1Q8IUX7 1158 aa23.26■■□□□ 1.31
CTDSP1-215ENST00000498160 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
CTDSP1-215ENST00000498160 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
CTDSP1-215ENST00000498160 RXRBP28702 533 aa23.25■■□□□ 1.31
CTDSP1-215ENST00000498160 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
CTDSP1-215ENST00000498160 THSD7AQ9UPZ6 1657 aa23.25■■□□□ 1.31
CTDSP1-215ENST00000498160 PKD1L3Q7Z443 1732 aa23.25■■□□□ 1.31
CTDSP1-215ENST00000498160 MEGF6O75095 1541 aa23.24■■□□□ 1.31
CTDSP1-215ENST00000498160 TNS2Q63HR2 1409 aa23.24■■□□□ 1.31
CTDSP1-215ENST00000498160 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
CTDSP1-215ENST00000498160 EXOC5O00471 708 aa23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 FAM98CQ17RN3 349 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 PCDH11XQ9BZA7 1347 aa23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 PCDH11YQ9BZA8 1340 aa23.22■■□□□ 1.31
CTDSP1-215ENST00000498160 DDB1Q16531 1140 aa23.21■■□□□ 1.31
CTDSP1-215ENST00000498160 NCBP3Q53F19 620 aaKnown RBP23.21■■□□□ 1.31
CTDSP1-215ENST00000498160 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
CTDSP1-215ENST00000498160 A0A0G2JS52 829 aa23.19■■□□□ 1.3
CTDSP1-215ENST00000498160 MYT1Q01538 1121 aa23.19■■□□□ 1.3
CTDSP1-215ENST00000498160 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
CTDSP1-215ENST00000498160 LMOD3Q0VAK6 560 aa23.18■■□□□ 1.3
CTDSP1-215ENST00000498160 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
CTDSP1-215ENST00000498160 NFE2L2Q16236 605 aa23.16■■□□□ 1.3
CTDSP1-215ENST00000498160 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
CTDSP1-215ENST00000498160 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
CTDSP1-215ENST00000498160 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 PDE3BQ13370 1112 aa23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 SEPT12Q8IYM1 358 aa23.15■■□□□ 1.3
CTDSP1-215ENST00000498160 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.29
CTDSP1-215ENST00000498160 PHACTR3Q96KR7 559 aa23.13■■□□□ 1.29
CTDSP1-215ENST00000498160 MAP3K5Q99683 1374 aa23.13■■□□□ 1.29
CTDSP1-215ENST00000498160 TMPOP42166 694 aaKnown RBP23.12■■□□□ 1.29
CTDSP1-215ENST00000498160 SHANK3Q9BYB0 1731 aa23.12■■□□□ 1.29
CTDSP1-215ENST00000498160 GNAT3A8MTJ3 354 aa23.11■■□□□ 1.29
CTDSP1-215ENST00000498160 PHKG2P15735 406 aa23.11■■□□□ 1.29
CTDSP1-215ENST00000498160 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
CTDSP1-215ENST00000498160 BCL9O00512 1426 aa23.1■■□□□ 1.29
CTDSP1-215ENST00000498160 APAF1O14727 1248 aa23.1■■□□□ 1.29
CTDSP1-215ENST00000498160 RGS12O14924 1447 aa23.09■■□□□ 1.29
CTDSP1-215ENST00000498160 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
CTDSP1-215ENST00000498160 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
CTDSP1-215ENST00000498160 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
CTDSP1-215ENST00000498160 CYP27B1O15528 508 aa23.08■■□□□ 1.29
CTDSP1-215ENST00000498160 RIPK4P57078 832 aa23.08■■□□□ 1.29
CTDSP1-215ENST00000498160 KRT27Q7Z3Y8 459 aa23.08■■□□□ 1.29
CTDSP1-215ENST00000498160 DDX54Q8TDD1 881 aaKnown RBP23.08■■□□□ 1.29
CTDSP1-215ENST00000498160 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
CTDSP1-215ENST00000498160 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
CTDSP1-215ENST00000498160 ADAMTS7Q9UKP4 1686 aa23.04■■□□□ 1.28
CTDSP1-215ENST00000498160 BRWD3Q6RI45 1802 aa23.03■■□□□ 1.28
CTDSP1-215ENST00000498160 ERVV-2B6SEH9 535 aa23.03■■□□□ 1.28
CTDSP1-215ENST00000498160 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
CTDSP1-215ENST00000498160 MARCH10Q8NA82 808 aaPredicted RBP23.03■■□□□ 1.28
CTDSP1-215ENST00000498160 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
CTDSP1-215ENST00000498160 NEUROD2Q15784 382 aa23.02■■□□□ 1.28
CTDSP1-215ENST00000498160 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
CTDSP1-215ENST00000498160 RNMTO43148 476 aaKnown RBP23■■□□□ 1.27
CTDSP1-215ENST00000498160 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
CTDSP1-215ENST00000498160 MRC1P22897 1456 aa22.99■■□□□ 1.27
CTDSP1-215ENST00000498160 HNRNPUQ00839 825 aaKnown RBP eCLIP22.99■■□□□ 1.27
CTDSP1-215ENST00000498160 TEFQ10587 303 aa22.99■■□□□ 1.27
CTDSP1-215ENST00000498160 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
CTDSP1-215ENST00000498160 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
CTDSP1-215ENST00000498160 MPRIPQ6WCQ1 1025 aa22.98■■□□□ 1.27
CTDSP1-215ENST00000498160 WDR63Q8IWG1 891 aa22.98■■□□□ 1.27
CTDSP1-215ENST00000498160 TRIM35Q9UPQ4 493 aa22.98■■□□□ 1.27
CTDSP1-215ENST00000498160 WWC1Q8IX03 1113 aa22.97■■□□□ 1.27
CTDSP1-215ENST00000498160 BABAM1Q9NWV8 329 aa22.97■■□□□ 1.27
CTDSP1-215ENST00000498160 IL16Q14005 1332 aa22.97■■□□□ 1.27
CTDSP1-215ENST00000498160 CABP4P57796 275 aa22.96■■□□□ 1.27
CTDSP1-215ENST00000498160 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.26
CTDSP1-215ENST00000498160 IL17REQ8NFR9 667 aa22.95■■□□□ 1.26
CTDSP1-215ENST00000498160 DOT1LQ8TEK3 1739 aa22.95■■□□□ 1.26
CTDSP1-215ENST00000498160 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
CTDSP1-215ENST00000498160 NHSQ6T4R5 1651 aa22.94■■□□□ 1.26
CTDSP1-215ENST00000498160 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
CTDSP1-215ENST00000498160 MCM10Q7L590 875 aa22.93■■□□□ 1.26
CTDSP1-215ENST00000498160 TOGARAM1Q9Y4F4 1720 aa22.93■■□□□ 1.26
CTDSP1-215ENST00000498160 GNAI1P63096 354 aa22.92■■□□□ 1.26
CTDSP1-215ENST00000498160 TAF7Q15545 349 aaPredicted RBP22.92■■□□□ 1.26
CTDSP1-215ENST00000498160 LGR6Q9HBX8 967 aa22.92■■□□□ 1.26
CTDSP1-215ENST00000498160 ZNF521Q96K83 1311 aa22.91■■□□□ 1.26
CTDSP1-215ENST00000498160 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
CTDSP1-215ENST00000498160 SBF2Q86WG5 1849 aa22.91■■□□□ 1.26
CTDSP1-215ENST00000498160 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
CTDSP1-215ENST00000498160 ITGB4P16144 1822 aa22.9■■□□□ 1.26
CTDSP1-215ENST00000498160 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
CTDSP1-215ENST00000498160 CFAP44Q96MT7 982 aa22.9■■□□□ 1.26
CTDSP1-215ENST00000498160 BCL11BQ9C0K0 894 aaPredicted RBP22.9■■□□□ 1.26
CTDSP1-215ENST00000498160 GOLGA2Q08379 1002 aa22.89■■□□□ 1.25
CTDSP1-215ENST00000498160 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms