RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 SMC4Q9NTJ3 1288 aa22.95■■□□□ 1.26
CHRNA4-206ENST00000498043 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
CHRNA4-206ENST00000498043 ABCC6O95255 1503 aa22.94■■□□□ 1.26
CHRNA4-206ENST00000498043 CRB1P82279 1406 aa22.94■■□□□ 1.26
CHRNA4-206ENST00000498043 LMO7Q8WWI1 1683 aa22.94■■□□□ 1.26
CHRNA4-206ENST00000498043 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
CHRNA4-206ENST00000498043 CHRNA2Q15822 529 aa22.94■■□□□ 1.26
CHRNA4-206ENST00000498043 SSH1Q8WYL5 1049 aa22.93■■□□□ 1.26
CHRNA4-206ENST00000498043 CPDO75976 1380 aa22.92■■□□□ 1.26
CHRNA4-206ENST00000498043 FAM208AQ9UK61 1670 aaKnown RBP22.91■■□□□ 1.26
CHRNA4-206ENST00000498043 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
CHRNA4-206ENST00000498043 TSPYL6Q8N831 410 aa22.91■■□□□ 1.26
CHRNA4-206ENST00000498043 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
CHRNA4-206ENST00000498043 PDE3AQ14432 1141 aa22.9■■□□□ 1.26
CHRNA4-206ENST00000498043 TNNQ9UQP3 1299 aa22.9■■□□□ 1.26
CHRNA4-206ENST00000498043 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.26
CHRNA4-206ENST00000498043 CHL1O00533 1208 aa22.88■■□□□ 1.25
CHRNA4-206ENST00000498043 HAP1P54257 671 aaPredicted RBP22.88■■□□□ 1.25
CHRNA4-206ENST00000498043 C8orf58Q8NAV2 365 aa22.88■■□□□ 1.25
CHRNA4-206ENST00000498043 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
CHRNA4-206ENST00000498043 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
CHRNA4-206ENST00000498043 NLRP2Q9NX02 1062 aa22.87■■□□□ 1.25
CHRNA4-206ENST00000498043 VAMP4O75379 141 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 ALDH1L2Q3SY69 923 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 CLUAP1Q96AJ1 413 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 MIS18AQ9NYP9 233 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 COG6Q9Y2V7 657 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 CSB-PGBD3P0DP91 1061 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 RLBP1P12271 317 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 ZKSCAN2Q63HK3 967 aa22.86■■□□□ 1.25
CHRNA4-206ENST00000498043 PRDM11Q9NQV5 511 aa22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 KIF16BQ96L93 1317 aa22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 KRT24Q2M2I5 525 aa22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
CHRNA4-206ENST00000498043 VIRMAQ69YN4 1812 aaKnown RBP22.84■■□□□ 1.25
CHRNA4-206ENST00000498043 IL17REQ8NFR9 667 aa22.84■■□□□ 1.25
CHRNA4-206ENST00000498043 TSPYL4Q9UJ04 414 aa22.84■■□□□ 1.25
CHRNA4-206ENST00000498043 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.25
CHRNA4-206ENST00000498043 NOB1Q9ULX3 412 aaKnown RBP22.83■■□□□ 1.25
CHRNA4-206ENST00000498043 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
CHRNA4-206ENST00000498043 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
CHRNA4-206ENST00000498043 TRIM27P14373 513 aa22.81■■□□□ 1.24
CHRNA4-206ENST00000498043 AMOTQ4VCS5 1084 aa22.81■■□□□ 1.24
CHRNA4-206ENST00000498043 MEGF6O75095 1541 aa22.81■■□□□ 1.24
CHRNA4-206ENST00000498043 ATF7IPQ6VMQ6 1270 aa22.8■■□□□ 1.24
CHRNA4-206ENST00000498043 DZIP1LQ8IYY4 767 aaKnown RBP22.8■■□□□ 1.24
CHRNA4-206ENST00000498043 CEMIPQ8WUJ3 1361 aa22.8■■□□□ 1.24
CHRNA4-206ENST00000498043 AKAP4Q5JQC9 854 aa22.8■■□□□ 1.24
CHRNA4-206ENST00000498043 RAPGEF4Q8WZA2 1011 aa22.79■■□□□ 1.24
CHRNA4-206ENST00000498043 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
CHRNA4-206ENST00000498043 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
CHRNA4-206ENST00000498043 MRPL50Q8N5N7 158 aaKnown RBP22.78■■□□□ 1.24
CHRNA4-206ENST00000498043 LGR6Q9HBX8 967 aa22.77■■□□□ 1.24
CHRNA4-206ENST00000498043 BRPF1P55201 1214 aaPredicted RBP22.77■■□□□ 1.23
CHRNA4-206ENST00000498043 PHLPP1O60346 1717 aa22.76■■□□□ 1.23
CHRNA4-206ENST00000498043 IPO8O15397 1037 aaKnown RBP22.76■■□□□ 1.23
CHRNA4-206ENST00000498043 MS4A1P11836 297 aa22.76■■□□□ 1.23
CHRNA4-206ENST00000498043 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
CHRNA4-206ENST00000498043 MPRIPQ6WCQ1 1025 aa22.76■■□□□ 1.23
CHRNA4-206ENST00000498043 TATP17735 454 aaPredicted RBP22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 TAF7Q15545 349 aaPredicted RBP22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 COL22A1Q8NFW1 1626 aaPredicted RBP22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 PKD1L3Q7Z443 1732 aa22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 WDR17Q8IZU2 1322 aa22.75■■□□□ 1.23
CHRNA4-206ENST00000498043 PARP4Q9UKK3 1724 aaKnown RBP22.73■■□□□ 1.23
CHRNA4-206ENST00000498043 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
CHRNA4-206ENST00000498043 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
CHRNA4-206ENST00000498043 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
CHRNA4-206ENST00000498043 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
CHRNA4-206ENST00000498043 TOM1L2Q6ZVM7 507 aa22.72■■□□□ 1.23
CHRNA4-206ENST00000498043 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
CHRNA4-206ENST00000498043 TMEM57Q8N5G2 664 aa22.72■■□□□ 1.23
CHRNA4-206ENST00000498043 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
CHRNA4-206ENST00000498043 TEFQ10587 303 aa22.71■■□□□ 1.23
CHRNA4-206ENST00000498043 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
CHRNA4-206ENST00000498043 SIPA1L3O60292 1781 aaPredicted RBP22.71■■□□□ 1.23
CHRNA4-206ENST00000498043 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.23
CHRNA4-206ENST00000498043 STRN4Q9NRL3 753 aa22.7■■□□□ 1.23
CHRNA4-206ENST00000498043 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
CHRNA4-206ENST00000498043 SCN11AQ9UI33 1791 aa22.7■■□□□ 1.22
CHRNA4-206ENST00000498043 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
CHRNA4-206ENST00000498043 ARHGAP45Q92619 1136 aa22.69■■□□□ 1.22
CHRNA4-206ENST00000498043 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
CHRNA4-206ENST00000498043 CENPQQ7L2Z9 268 aaPredicted RBP22.68■■□□□ 1.22
CHRNA4-206ENST00000498043 PLEKHG2Q9H7P9 1386 aa22.68■■□□□ 1.22
CHRNA4-206ENST00000498043 KDM6AO15550 1401 aaPredicted RBP22.67■■□□□ 1.22
CHRNA4-206ENST00000498043 LARP1Q6PKG0 1096 aaKnown RBP22.67■■□□□ 1.22
CHRNA4-206ENST00000498043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.67■■□□□ 1.22
CHRNA4-206ENST00000498043 DDX19BQ9UMR2 479 aa22.67■■□□□ 1.22
CHRNA4-206ENST00000498043 TOM1O60784 492 aa22.66■■□□□ 1.22
CHRNA4-206ENST00000498043 PHKG2P15735 406 aa22.66■■□□□ 1.22
CHRNA4-206ENST00000498043 AAMPQ13685 434 aa22.66■■□□□ 1.22
CHRNA4-206ENST00000498043 BTBD11A6QL63 1104 aa22.66■■□□□ 1.22
CHRNA4-206ENST00000498043 EVA1CP58658 441 aa22.66■■□□□ 1.22
CHRNA4-206ENST00000498043 ABCC4O15439 1325 aa22.65■■□□□ 1.22
CHRNA4-206ENST00000498043 API5Q9BZZ5 524 aaKnown RBP22.64■■□□□ 1.22
CHRNA4-206ENST00000498043 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms