RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 PIK3C2BO00750 1634 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 KCNJ4P48050 445 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 GCC1Q96CN9 775 aa9.91□□□□□ -0.82
HLA-DMB-262ENST00000498020 IL13P35225 146 aa9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 GPR162Q16538 588 aa9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 LNPKQ9C0E8 428 aa9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 PPLO60437 1756 aa9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 ARHGAP45Q92619 1136 aa9.9□□□□□ -0.82
HLA-DMB-262ENST00000498020 MYO3AQ8NEV4 1616 aa9.9□□□□□ -0.83
HLA-DMB-262ENST00000498020 PLEKHG3A1L390 1219 aa9.9□□□□□ -0.83
HLA-DMB-262ENST00000498020 MED14O60244 1454 aa9.9□□□□□ -0.83
HLA-DMB-262ENST00000498020 PTPRMP28827 1452 aa9.9□□□□□ -0.83
HLA-DMB-262ENST00000498020 C16orf71Q8IYS4 520 aaPredicted RBP9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 CWC22Q9HCG8 908 aaKnown RBP9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 POLD1P28340 1107 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 FAM98CQ17RN3 349 aaKnown RBP9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 AATKQ6ZMQ8 1374 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 PTMAP06454 111 aaKnown RBP9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 CABP4P57796 275 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 LTKP29376 864 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 HDAC1Q13547 482 aaPredicted RBP9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 TFCP2L1Q9NZI6 479 aa9.89□□□□□ -0.83
HLA-DMB-262ENST00000498020 RAD21O60216 631 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 HSP90AB1P08238 724 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 SLKQ9H2G2 1235 aaPredicted RBP9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 FGD1P98174 961 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 DCTN1Q14203 1278 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 EIF4A2Q14240 407 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 PLEKHG1Q9ULL1 1385 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 ARHGEF40Q8TER5 1519 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
HLA-DMB-262ENST00000498020 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 APBA3O96018 575 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 DLC1Q96QB1 1528 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 VAMP4O75379 141 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 DDB1Q16531 1140 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 VPS37DQ86XT2 251 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 BTG4Q9NY30 223 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 PREX1Q8TCU6 1659 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 C22orf23Q9BZE7 217 aa9.87□□□□□ -0.83
HLA-DMB-262ENST00000498020 NLRP1Q9C000 1473 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 CHD1LQ86WJ1 897 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 MCM10Q7L590 875 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 AK7Q96M32 723 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 ORAI2Q96SN7 254 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
HLA-DMB-262ENST00000498020 FAM83GA6ND36 823 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 NAP1L2Q9ULW6 460 aaPredicted RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 C1orf115Q9H7X2 142 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 HDAC5Q9UQL6 1122 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 FKBP5Q13451 457 aaPredicted RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 PLEKHO1Q53GL0 409 aaPredicted RBP9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 MYOM1P52179 1685 aa9.85□□□□□ -0.83
HLA-DMB-262ENST00000498020 ZBTB40Q9NUA8 1239 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 FLT4P35916 1363 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 RPAP2Q8IXW5 612 aaPredicted RBP9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 IFT172Q9UG01 1749 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 ZPR1O75312 459 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 KCNH5Q8NCM2 988 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 PRR36Q9H6K5 1346 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 SPATA31D1Q6ZQQ2 1576 aa9.84□□□□□ -0.83
HLA-DMB-262ENST00000498020 CCT4P50991 539 aaKnown RBP9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 SMC5Q8IY18 1101 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 C8orf58Q8NAV2 365 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 ZNF526Q8TF50 670 aaPredicted RBP9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 REREQ9P2R6 1566 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 GNAI3P08754 354 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 MAP3K19Q56UN5 1328 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 HSPA1LP34931 641 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 NEXNQ0ZGT2 675 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 STK32BQ9NY57 414 aa9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
HLA-DMB-262ENST00000498020 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 PTPRCP08575 1304 aa9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 DNTTIP2Q5QJE6 756 aaKnown RBP9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 MCCP23508 829 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms