RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
CCDC58-206ENST00000497726 USP19O94966 1318 aa13.9□□□□□ -0.19
CCDC58-206ENST00000497726 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
CCDC58-206ENST00000497726 USP6P35125 1406 aa13.89□□□□□ -0.19
CCDC58-206ENST00000497726 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
CCDC58-206ENST00000497726 QSER1Q2KHR3 1735 aa13.88□□□□□ -0.19
CCDC58-206ENST00000497726 FSTL1Q12841 308 aa13.88□□□□□ -0.19
CCDC58-206ENST00000497726 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
CCDC58-206ENST00000497726 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
CCDC58-206ENST00000497726 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
CCDC58-206ENST00000497726 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
CCDC58-206ENST00000497726 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
CCDC58-206ENST00000497726 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
CCDC58-206ENST00000497726 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
CCDC58-206ENST00000497726 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
CCDC58-206ENST00000497726 BTAF1O14981 1849 aa13.85□□□□□ -0.19
CCDC58-206ENST00000497726 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
CCDC58-206ENST00000497726 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
CCDC58-206ENST00000497726 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
CCDC58-206ENST00000497726 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CCDC58-206ENST00000497726 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
CCDC58-206ENST00000497726 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
CCDC58-206ENST00000497726 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
CCDC58-206ENST00000497726 SOX12O15370 315 aa13.82□□□□□ -0.2
CCDC58-206ENST00000497726 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
CCDC58-206ENST00000497726 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
CCDC58-206ENST00000497726 MLLT1Q03111 559 aaPredicted RBP13.81□□□□□ -0.2
CCDC58-206ENST00000497726 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
CCDC58-206ENST00000497726 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
CCDC58-206ENST00000497726 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
CCDC58-206ENST00000497726 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
CCDC58-206ENST00000497726 KAT6BQ8WYB5 2073 aa13.79□□□□□ -0.2
CCDC58-206ENST00000497726 FOXN1O15353 648 aa13.79□□□□□ -0.2
CCDC58-206ENST00000497726 NLRP6P59044 892 aa13.79□□□□□ -0.2
CCDC58-206ENST00000497726 USP47Q96K76 1375 aa13.79□□□□□ -0.2
CCDC58-206ENST00000497726 ST20-MTHFSA0A0A6YYL1 179 aa13.78□□□□□ -0.2
CCDC58-206ENST00000497726 ABCB7O75027 752 aa13.78□□□□□ -0.2
CCDC58-206ENST00000497726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■□ 20.3
CCDC58-206ENST00000497726 SLIT3O75094 1523 aa13.77□□□□□ -0.21
CCDC58-206ENST00000497726 COL18A1P39060 1754 aa13.77□□□□□ -0.21
CCDC58-206ENST00000497726 ABHD8Q96I13 439 aa13.77□□□□□ -0.21
CCDC58-206ENST00000497726 CICQ96RK0 1608 aaPredicted RBP13.77□□□□□ -0.21
CCDC58-206ENST00000497726 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
CCDC58-206ENST00000497726 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
CCDC58-206ENST00000497726 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
CCDC58-206ENST00000497726 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
CCDC58-206ENST00000497726 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
CCDC58-206ENST00000497726 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
CCDC58-206ENST00000497726 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
CCDC58-206ENST00000497726 ARHGAP27Q6ZUM4 889 aa13.75□□□□□ -0.21
CCDC58-206ENST00000497726 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
CCDC58-206ENST00000497726 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
CCDC58-206ENST00000497726 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
CCDC58-206ENST00000497726 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
CCDC58-206ENST00000497726 ABCC6O95255 1503 aa13.74□□□□□ -0.21
CCDC58-206ENST00000497726 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
CCDC58-206ENST00000497726 LTN1O94822 1766 aa13.73□□□□□ -0.21
CCDC58-206ENST00000497726 NME9Q86XW9 330 aa13.73□□□□□ -0.21
CCDC58-206ENST00000497726 TESK2Q96S53 571 aa13.73□□□□□ -0.21
CCDC58-206ENST00000497726 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
CCDC58-206ENST00000497726 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
CCDC58-206ENST00000497726 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
CCDC58-206ENST00000497726 C9orf131Q5VYM1 1079 aa13.72□□□□□ -0.21
CCDC58-206ENST00000497726 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
CCDC58-206ENST00000497726 BCS1LQ9Y276 419 aa13.72□□□□□ -0.21
CCDC58-206ENST00000497726 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
CCDC58-206ENST00000497726 NFAT5O94916 1531 aa13.71□□□□□ -0.21
CCDC58-206ENST00000497726 RGS19P49795 217 aa13.71□□□□□ -0.21
CCDC58-206ENST00000497726 SYTL4Q96C24 671 aaPredicted RBP13.71□□□□□ -0.21
CCDC58-206ENST00000497726 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
CCDC58-206ENST00000497726 KDM2BQ8NHM5 1336 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
CCDC58-206ENST00000497726 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
CCDC58-206ENST00000497726 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
CCDC58-206ENST00000497726 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
CCDC58-206ENST00000497726 TMF1P82094 1093 aa13.69□□□□□ -0.22
CCDC58-206ENST00000497726 C10orf71Q711Q0 1435 aa13.68□□□□□ -0.22
CCDC58-206ENST00000497726 IL2RBP14784 551 aa13.68□□□□□ -0.22
CCDC58-206ENST00000497726 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
CCDC58-206ENST00000497726 LBX1P52954 281 aa13.68□□□□□ -0.22
CCDC58-206ENST00000497726 KIF20BQ96Q89 1820 aa13.68□□□□□ -0.22
CCDC58-206ENST00000497726 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
CCDC58-206ENST00000497726 ERBB3P21860 1342 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 AMIGO3Q86WK7 504 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 LY75O60449 1722 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
CCDC58-206ENST00000497726 NSD2O96028 1365 aa13.65□□□□□ -0.22
CCDC58-206ENST00000497726 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
CCDC58-206ENST00000497726 TNRC18O15417 2968 aaPredicted RBP13.64□□□□□ -0.23
CCDC58-206ENST00000497726 USP31Q70CQ4 1352 aa13.64□□□□□ -0.23
CCDC58-206ENST00000497726 ANKRD36BQ8N2N9 1353 aa13.64□□□□□ -0.23
CCDC58-206ENST00000497726 FLAD1Q8NFF5 587 aa13.64□□□□□ -0.23
CCDC58-206ENST00000497726 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms