RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
COMMD6-212ENST00000497707 ZNF853P0CG23 659 aa14.39□□□□□ -0.11
COMMD6-212ENST00000497707 IL16Q14005 1332 aa14.39□□□□□ -0.11
COMMD6-212ENST00000497707 NEFMP07197 916 aa14.38□□□□□ -0.11
COMMD6-212ENST00000497707 COL5A2P05997 1499 aaPredicted RBP14.38□□□□□ -0.11
COMMD6-212ENST00000497707 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
COMMD6-212ENST00000497707 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
COMMD6-212ENST00000497707 WDR17Q8IZU2 1322 aa14.37□□□□□ -0.11
COMMD6-212ENST00000497707 CRB1P82279 1406 aa14.36□□□□□ -0.11
COMMD6-212ENST00000497707 LARP1Q6PKG0 1096 aaKnown RBP14.36□□□□□ -0.11
COMMD6-212ENST00000497707 MCM10Q7L590 875 aa14.36□□□□□ -0.11
COMMD6-212ENST00000497707 IL17REQ8NFR9 667 aa14.36□□□□□ -0.11
COMMD6-212ENST00000497707 COL14A1Q05707 1796 aaKnown RBP14.35□□□□□ -0.11
COMMD6-212ENST00000497707 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
COMMD6-212ENST00000497707 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
COMMD6-212ENST00000497707 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
COMMD6-212ENST00000497707 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
COMMD6-212ENST00000497707 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
COMMD6-212ENST00000497707 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
COMMD6-212ENST00000497707 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
COMMD6-212ENST00000497707 MEGF6O75095 1541 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 CHL1O00533 1208 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 HSPA1LP34931 641 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 PLEKHO1Q53GL0 409 aaPredicted RBP14.33□□□□□ -0.12
COMMD6-212ENST00000497707 CARD10Q9BWT7 1032 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
COMMD6-212ENST00000497707 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
COMMD6-212ENST00000497707 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
COMMD6-212ENST00000497707 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 EXOSC9Q06265 439 aaKnown RBP14.32□□□□□ -0.12
COMMD6-212ENST00000497707 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
COMMD6-212ENST00000497707 CFAP44Q96MT7 982 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 STRN4Q9NRL3 753 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 MBIPQ9NS73 344 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
COMMD6-212ENST00000497707 EVA1CP58658 441 aa14.31□□□□□ -0.12
COMMD6-212ENST00000497707 TOM1L2Q6ZVM7 507 aa14.31□□□□□ -0.12
COMMD6-212ENST00000497707 MAP3K5Q99683 1374 aa14.31□□□□□ -0.12
COMMD6-212ENST00000497707 JCADQ9P266 1359 aa14.31□□□□□ -0.12
COMMD6-212ENST00000497707 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
COMMD6-212ENST00000497707 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
COMMD6-212ENST00000497707 GNAI1P63096 354 aa14.3□□□□□ -0.12
COMMD6-212ENST00000497707 POLA2Q14181 598 aa14.3□□□□□ -0.12
COMMD6-212ENST00000497707 AKAP4Q5JQC9 854 aa14.3□□□□□ -0.12
COMMD6-212ENST00000497707 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
COMMD6-212ENST00000497707 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
COMMD6-212ENST00000497707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
COMMD6-212ENST00000497707 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
COMMD6-212ENST00000497707 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
COMMD6-212ENST00000497707 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
COMMD6-212ENST00000497707 MIS18AQ9NYP9 233 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 CEMIPQ8WUJ3 1361 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 LRRC37A3O60309 1634 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 ADAMTS7Q9UKP4 1686 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
COMMD6-212ENST00000497707 CYP27B1O15528 508 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 RNMTO43148 476 aaKnown RBP14.28□□□□□ -0.12
COMMD6-212ENST00000497707 BCAR3O75815 825 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 SLIT2O94813 1529 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
COMMD6-212ENST00000497707 CALD1Q05682 793 aaKnown RBP14.28□□□□□ -0.12
COMMD6-212ENST00000497707 FKBP8Q14318 412 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 TSPYL6Q8N831 410 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
COMMD6-212ENST00000497707 LRP6O75581 1613 aa14.27□□□□□ -0.12
COMMD6-212ENST00000497707 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.12
COMMD6-212ENST00000497707 PLIN1O60240 522 aa14.27□□□□□ -0.13
COMMD6-212ENST00000497707 VAMP4O75379 141 aa14.27□□□□□ -0.13
COMMD6-212ENST00000497707 PHKG2P15735 406 aa14.27□□□□□ -0.13
COMMD6-212ENST00000497707 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
COMMD6-212ENST00000497707 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
COMMD6-212ENST00000497707 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
COMMD6-212ENST00000497707 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
COMMD6-212ENST00000497707 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.13
COMMD6-212ENST00000497707 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
COMMD6-212ENST00000497707 DISP2A7MBM2 1401 aa14.25□□□□□ -0.13
COMMD6-212ENST00000497707 IL2RBP14784 551 aa14.25□□□□□ -0.13
COMMD6-212ENST00000497707 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
COMMD6-212ENST00000497707 KRT24Q2M2I5 525 aa14.25□□□□□ -0.13
COMMD6-212ENST00000497707 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
COMMD6-212ENST00000497707 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
COMMD6-212ENST00000497707 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
COMMD6-212ENST00000497707 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
COMMD6-212ENST00000497707 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
COMMD6-212ENST00000497707 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
COMMD6-212ENST00000497707 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
COMMD6-212ENST00000497707 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
COMMD6-212ENST00000497707 BCL9LQ86UU0 1499 aa14.24□□□□□ -0.13
COMMD6-212ENST00000497707 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
COMMD6-212ENST00000497707 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 KCNQ3O43525 872 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
COMMD6-212ENST00000497707 IFNL2Q8IZJ0 200 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms