RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
PHC3-217ENST00000497658 NCKAP5LQ9HCH0 1330 aa7.1□□□□□ -1.27
PHC3-217ENST00000497658 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
PHC3-217ENST00000497658 TERF1P54274 439 aa7.09□□□□□ -1.27
PHC3-217ENST00000497658 PCDHGA10Q9Y5H3 936 aa7.09□□□□□ -1.27
PHC3-217ENST00000497658 KIF16BQ96L93 1317 aa7.09□□□□□ -1.27
PHC3-217ENST00000497658 MYO3AQ8NEV4 1616 aa7.09□□□□□ -1.27
PHC3-217ENST00000497658 PLCH2O75038 1416 aa7.09□□□□□ -1.27
PHC3-217ENST00000497658 SHPRHQ149N8 1683 aa7.09□□□□□ -1.28
PHC3-217ENST00000497658 ONECUT3O60422 494 aaPredicted RBP7.08□□□□□ -1.28
PHC3-217ENST00000497658 MORC1Q86VD1 984 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
PHC3-217ENST00000497658 PDCL3Q9H2J4 239 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 SHROOM2Q13796 1616 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
PHC3-217ENST00000497658 CCDC173Q0VFZ6 552 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 EFCAB2Q5VUJ9 269 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 CLEC17AQ6ZS10 378 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 PUS7Q96PZ0 661 aaKnown RBP7.08□□□□□ -1.28
PHC3-217ENST00000497658 KIAA1468Q9P260 1216 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 USP32Q8NFA0 1604 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 MAP3K4Q9Y6R4 1608 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 TET3O43151 1660 aa7.08□□□□□ -1.28
PHC3-217ENST00000497658 ZNF518AQ6AHZ1 1483 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 DEPDC5O75140 1603 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 CLTCL1P53675 1640 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 GOLGA6L22H0YM25 854 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 MAP3K9P80192 1104 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 VSIG10Q8N0Z9 540 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 ZMYND15Q9H091 742 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 CHMP4BQ9H444 224 aaKnown RBP7.07□□□□□ -1.28
PHC3-217ENST00000497658 NSD2O96028 1365 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 HS1BP3Q53T59 392 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 TNPO1Q92973 898 aaKnown RBP7.07□□□□□ -1.28
PHC3-217ENST00000497658 CFAP44Q96MT7 982 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 PPP1R9BQ96SB3 815 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 DNAJC5Q9H3Z4 198 aa7.07□□□□□ -1.28
PHC3-217ENST00000497658 IPO8O15397 1037 aaKnown RBP7.06□□□□□ -1.28
PHC3-217ENST00000497658 NEUROD2Q15784 382 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 BMP2KLQ5H9B9 411 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 ARXQ96QS3 562 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 IL16Q14005 1332 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 NRXN1Q9ULB1 1477 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 ABCC1P33527 1531 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 SETBP1Q9Y6X0 1596 aa7.06□□□□□ -1.28
PHC3-217ENST00000497658 HSP90AB1P08238 724 aaKnown RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 NKX1-1Q15270 411 aaPredicted RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 TYW1BQ6NUM6 668 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ATF7IPQ6VMQ6 1270 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ZSCAN30Q86W11 494 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 RYDENQ9NUL5 291 aaKnown RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 ABCC11Q96J66 1382 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 NSD3Q9BZ95 1437 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 VWDEQ8N2E2 1590 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ADGRB2O60241 1585 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ARAP3Q8WWN8 1544 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ARHGAP31Q2M1Z3 1444 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 SPAG9O60271 1321 aaKnown RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 NRG2O14511 850 aaPredicted RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 TRIM27P14373 513 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 NUCB1Q02818 461 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 KLHL40Q2TBA0 621 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 MAP7D2Q96T17 732 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 BCL2L13Q9BXK5 485 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 SMC4Q9NTJ3 1288 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 ZBTB40Q9NUA8 1239 aa7.05□□□□□ -1.28
PHC3-217ENST00000497658 TSR3Q9UJK0 312 aaKnown RBP7.05□□□□□ -1.28
PHC3-217ENST00000497658 ERBB4Q15303 1308 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 PHF14O94880 888 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 MTHFSP49914 203 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 SEPT9Q9UHD8 586 aaPredicted RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 TNNQ9UQP3 1299 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 RRP7AQ9Y3A4 280 aaKnown RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 ABCA6Q8N139 1617 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 K7ELQ4 463 aaPredicted RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 OFD1O75665 1012 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 MSNP26038 577 aaKnown RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 NASPP49321 788 aaPredicted RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
PHC3-217ENST00000497658 ALDH1L2Q3SY69 923 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 ITPRIPQ8IWB1 547 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 GCC1Q96CN9 775 aa7.04□□□□□ -1.28
PHC3-217ENST00000497658 REREQ9P2R6 1566 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 MTERF4Q7Z6M4 381 aaKnown RBP7.03□□□□□ -1.28
PHC3-217ENST00000497658 CHD1LQ86WJ1 897 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 GAS2L3Q86XJ1 694 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.03□□□□□ -1.28
PHC3-217ENST00000497658 HPS5Q9UPZ3 1129 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 NOS1P29475 1434 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 TRAPPC8Q9Y2L5 1435 aa7.03□□□□□ -1.28
PHC3-217ENST00000497658 CHGAP10645 457 aaKnown RBP7.02□□□□□ -1.29
PHC3-217ENST00000497658 FAM98CQ17RN3 349 aaKnown RBP7.02□□□□□ -1.29
PHC3-217ENST00000497658 KIAA1211Q6ZU35 1233 aa7.02□□□□□ -1.29
PHC3-217ENST00000497658 DDX27Q96GQ7 796 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms