RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
ATP13A3-210ENST00000497567 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
ATP13A3-210ENST00000497567 ADH1AP07327 375 aa11.9□□□□□ -0.5
ATP13A3-210ENST00000497567 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
ATP13A3-210ENST00000497567 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
ATP13A3-210ENST00000497567 USP4Q13107 963 aa11.89□□□□□ -0.51
ATP13A3-210ENST00000497567 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
ATP13A3-210ENST00000497567 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
ATP13A3-210ENST00000497567 MYCP01106 439 aaPredicted RBP11.88□□□□□ -0.51
ATP13A3-210ENST00000497567 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
ATP13A3-210ENST00000497567 RELBQ01201 579 aa11.88□□□□□ -0.51
ATP13A3-210ENST00000497567 EML3Q32P44 896 aa11.88□□□□□ -0.51
ATP13A3-210ENST00000497567 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
ATP13A3-210ENST00000497567 C6orf118Q5T5N4 469 aa11.87□□□□□ -0.51
ATP13A3-210ENST00000497567 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
ATP13A3-210ENST00000497567 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
ATP13A3-210ENST00000497567 STAU1O95793 577 aaKnown RBP11.86□□□□□ -0.51
ATP13A3-210ENST00000497567 RFX1P22670 979 aa11.86□□□□□ -0.51
ATP13A3-210ENST00000497567 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
ATP13A3-210ENST00000497567 LZTS3O60299 673 aaPredicted RBP11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 PTGIRP43119 386 aa11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 TSEN34Q9BSV6 310 aaKnown RBP11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 ZNF395Q9H8N7 513 aaPredicted RBP11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 SERPINA10Q9UK55 444 aa11.85□□□□□ -0.51
ATP13A3-210ENST00000497567 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
ATP13A3-210ENST00000497567 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
ATP13A3-210ENST00000497567 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
ATP13A3-210ENST00000497567 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
ATP13A3-210ENST00000497567 PCDHGA11Q9Y5H2 935 aa11.84□□□□□ -0.51
ATP13A3-210ENST00000497567 BMP2P12643 396 aa11.83□□□□□ -0.52
ATP13A3-210ENST00000497567 CYP2U1Q7Z449 544 aa11.83□□□□□ -0.52
ATP13A3-210ENST00000497567 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
ATP13A3-210ENST00000497567 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
ATP13A3-210ENST00000497567 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
ATP13A3-210ENST00000497567 POTECB2RU33 542 aa11.82□□□□□ -0.52
ATP13A3-210ENST00000497567 GTF2IP78347 998 aa11.82□□□□□ -0.52
ATP13A3-210ENST00000497567 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
ATP13A3-210ENST00000497567 RAB6BQ9NRW1 208 aa11.82□□□□□ -0.52
ATP13A3-210ENST00000497567 UPP2O95045 317 aa11.81□□□□□ -0.52
ATP13A3-210ENST00000497567 SCARF1Q14162 830 aa11.81□□□□□ -0.52
ATP13A3-210ENST00000497567 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
ATP13A3-210ENST00000497567 INSM2Q96T92 566 aaPredicted RBP11.81□□□□□ -0.52
ATP13A3-210ENST00000497567 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
ATP13A3-210ENST00000497567 A0A1W2PRU2 124 aa11.8□□□□□ -0.52
ATP13A3-210ENST00000497567 SPINT1O43278 529 aa11.8□□□□□ -0.52
ATP13A3-210ENST00000497567 CLDN10P78369 228 aa11.8□□□□□ -0.52
ATP13A3-210ENST00000497567 ARID3AQ99856 593 aa11.8□□□□□ -0.52
ATP13A3-210ENST00000497567 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
ATP13A3-210ENST00000497567 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
ATP13A3-210ENST00000497567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 GNRH1P01148 92 aa11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 CTSOP43234 321 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 SCNN1DP51172 638 aa11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 ETNK1Q9HBU6 452 aa11.78□□□□□ -0.52
ATP13A3-210ENST00000497567 MEN1O00255 615 aa11.77□□□□□ -0.53
ATP13A3-210ENST00000497567 IL2RAP01589 272 aa11.77□□□□□ -0.53
ATP13A3-210ENST00000497567 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
ATP13A3-210ENST00000497567 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.53
ATP13A3-210ENST00000497567 CRTC2Q53ET0 693 aaPredicted RBP11.76□□□□□ -0.53
ATP13A3-210ENST00000497567 DNAAF2Q9NVR5 837 aaKnown RBP11.76□□□□□ -0.53
ATP13A3-210ENST00000497567 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 SNRPBP14678 240 aaKnown RBP11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 RASA1P20936 1047 aa11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 GDF10P55107 478 aa11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 PSME1Q06323 249 aa11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 CLN3Q13286 438 aa11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 POLMQ9NP87 494 aaPredicted RBP11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
ATP13A3-210ENST00000497567 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
ATP13A3-210ENST00000497567 CNKSR1Q969H4 720 aa11.74□□□□□ -0.53
ATP13A3-210ENST00000497567 TRIM47Q96LD4 638 aa11.74□□□□□ -0.53
ATP13A3-210ENST00000497567 SOBPA7XYQ1 873 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 DKK1O94907 266 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 ATP1A2P50993 1020 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
ATP13A3-210ENST00000497567 FIGNL2A6NMB9 653 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 TTLL8A6PVC2 850 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 INHAP05111 366 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 PTK7Q13308 1070 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L15C9J2P7 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L13C9JLJ4 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L12C9JPN9 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L11C9JVI0 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L21D6R901 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L18D6R9N7 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L22D6RA61 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L19D6RCP7 530 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms