RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 LYSMD3Q7Z3D4 306 aa8.31□□□□□ -1.08
CBX3-208ENST00000497498 GPC1P35052 558 aa8.3□□□□□ -1.08
CBX3-208ENST00000497498 SCTRP47872 440 aa8.3□□□□□ -1.08
CBX3-208ENST00000497498 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
CBX3-208ENST00000497498 PCDHB11Q9Y5F2 797 aa8.3□□□□□ -1.08
CBX3-208ENST00000497498 TRAK2O60296 914 aa8.29□□□□□ -1.08
CBX3-208ENST00000497498 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
CBX3-208ENST00000497498 A0A1W2PRU2 124 aa8.28□□□□□ -1.08
CBX3-208ENST00000497498 IRF5Q13568 498 aa8.28□□□□□ -1.08
CBX3-208ENST00000497498 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
CBX3-208ENST00000497498 OSBPL3Q9H4L5 887 aa8.28□□□□□ -1.08
CBX3-208ENST00000497498 MEN1O00255 615 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 CLN3Q13286 438 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 PRICKLE2Q7Z3G6 844 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 CYP2U1Q7Z449 544 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
CBX3-208ENST00000497498 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
CBX3-208ENST00000497498 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
CBX3-208ENST00000497498 SV2AQ7L0J3 742 aa8.26□□□□□ -1.09
CBX3-208ENST00000497498 PRKCSHP14314 528 aaPredicted RBP8.25□□□□□ -1.09
CBX3-208ENST00000497498 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
CBX3-208ENST00000497498 GRIP2Q9C0E4 1043 aa8.25□□□□□ -1.09
CBX3-208ENST00000497498 CDC14CA4D256 554 aa8.24□□□□□ -1.09
CBX3-208ENST00000497498 RHOQP17081 205 aa8.24□□□□□ -1.09
CBX3-208ENST00000497498 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
CBX3-208ENST00000497498 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
CBX3-208ENST00000497498 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
CBX3-208ENST00000497498 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
CBX3-208ENST00000497498 GNRH1P01148 92 aa8.23□□□□□ -1.09
CBX3-208ENST00000497498 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
CBX3-208ENST00000497498 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
CBX3-208ENST00000497498 SLURP2P0DP57 97 aa8.22□□□□□ -1.09
CBX3-208ENST00000497498 WDR44Q5JSH3 913 aa8.22□□□□□ -1.09
CBX3-208ENST00000497498 ESF1Q9H501 851 aaKnown RBP8.22□□□□□ -1.09
CBX3-208ENST00000497498 GDPD2Q9HCC8 539 aa8.22□□□□□ -1.09
CBX3-208ENST00000497498 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 POU4F2Q12837 409 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 SLC27A3Q5K4L6 730 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 GMCL1Q96IK5 515 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 CHIC2Q9UKJ5 165 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 DYRK1BQ9Y463 629 aa8.21□□□□□ -1.1
CBX3-208ENST00000497498 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
CBX3-208ENST00000497498 MCM6Q14566 821 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
CBX3-208ENST00000497498 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 ESYT1Q9BSJ8 1104 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
CBX3-208ENST00000497498 IL2RAP01589 272 aa8.19□□□□□ -1.1
CBX3-208ENST00000497498 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
CBX3-208ENST00000497498 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
CBX3-208ENST00000497498 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
CBX3-208ENST00000497498 RAB6BQ9NRW1 208 aa8.19□□□□□ -1.1
CBX3-208ENST00000497498 ABL2P42684 1182 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 USP4Q13107 963 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 GAS6Q14393 721 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 DBN1Q16643 649 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
CBX3-208ENST00000497498 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
CBX3-208ENST00000497498 XAGE2Q96GT9 111 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 DOLKQ9UPQ8 538 aa8.18□□□□□ -1.1
CBX3-208ENST00000497498 CENPCQ03188 943 aa8.17□□□□□ -1.1
CBX3-208ENST00000497498 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
CBX3-208ENST00000497498 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
CBX3-208ENST00000497498 H7C1W4 665 aa8.16□□□□□ -1.1
CBX3-208ENST00000497498 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
CBX3-208ENST00000497498 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
CBX3-208ENST00000497498 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
CBX3-208ENST00000497498 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
CBX3-208ENST00000497498 ADAMTS2O95450 1211 aa8.15□□□□□ -1.1
CBX3-208ENST00000497498 SOX11P35716 441 aa8.15□□□□□ -1.1
CBX3-208ENST00000497498 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
CBX3-208ENST00000497498 GAS2L1Q99501 681 aaPredicted RBP8.15□□□□□ -1.1
CBX3-208ENST00000497498 TIMMDC1Q9NPL8 285 aa8.15□□□□□ -1.1
CBX3-208ENST00000497498 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.1
CBX3-208ENST00000497498 ARHGEF15O94989 841 aa8.14□□□□□ -1.11
CBX3-208ENST00000497498 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
CBX3-208ENST00000497498 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
CBX3-208ENST00000497498 SVOPQ8N4V2 548 aa8.14□□□□□ -1.11
CBX3-208ENST00000497498 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
CBX3-208ENST00000497498 F11P03951 625 aa8.13□□□□□ -1.11
CBX3-208ENST00000497498 GSK3AP49840 483 aa8.13□□□□□ -1.11
CBX3-208ENST00000497498 MAP7D1Q3KQU3 841 aa8.13□□□□□ -1.11
CBX3-208ENST00000497498 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
CBX3-208ENST00000497498 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
CBX3-208ENST00000497498 COG6Q9Y2V7 657 aa8.13□□□□□ -1.11
CBX3-208ENST00000497498 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
CBX3-208ENST00000497498 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
CBX3-208ENST00000497498 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
CBX3-208ENST00000497498 ETNK1Q9HBU6 452 aa8.12□□□□□ -1.11
CBX3-208ENST00000497498 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
CBX3-208ENST00000497498 GPR25O00155 361 aa8.11□□□□□ -1.11
CBX3-208ENST00000497498 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
CBX3-208ENST00000497498 PLPP7Q8NBV4 271 aa8.11□□□□□ -1.11
CBX3-208ENST00000497498 A0A1B0GTH6 734 aa8.1□□□□□ -1.11
CBX3-208ENST00000497498 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms