RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 CCDC146Q8IYE0 955 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 KDRP35968 1356 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-206ENST00000497399 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 A0A0G2JS52 829 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 FCHSD2O94868 740 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 TRIM37O94972 964 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
TCTN3-206ENST00000497399 MYT1Q01538 1121 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-206ENST00000497399 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
TCTN3-206ENST00000497399 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
TCTN3-206ENST00000497399 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
TCTN3-206ENST00000497399 DLG5Q8TDM6 1919 aa13.02□□□□□ -0.32
TCTN3-206ENST00000497399 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
TCTN3-206ENST00000497399 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
TCTN3-206ENST00000497399 APAF1O14727 1248 aa13.01□□□□□ -0.33
TCTN3-206ENST00000497399 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
TCTN3-206ENST00000497399 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
TCTN3-206ENST00000497399 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
TCTN3-206ENST00000497399 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
TCTN3-206ENST00000497399 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
TCTN3-206ENST00000497399 USP35Q9P2H5 1018 aa13□□□□□ -0.33
TCTN3-206ENST00000497399 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
TCTN3-206ENST00000497399 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
TCTN3-206ENST00000497399 APBA3O96018 575 aa12.98□□□□□ -0.33
TCTN3-206ENST00000497399 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
TCTN3-206ENST00000497399 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
TCTN3-206ENST00000497399 CRB1P82279 1406 aa12.97□□□□□ -0.33
TCTN3-206ENST00000497399 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
TCTN3-206ENST00000497399 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
TCTN3-206ENST00000497399 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
TCTN3-206ENST00000497399 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
TCTN3-206ENST00000497399 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
TCTN3-206ENST00000497399 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
TCTN3-206ENST00000497399 EVA1CP58658 441 aa12.96□□□□□ -0.33
TCTN3-206ENST00000497399 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
TCTN3-206ENST00000497399 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
TCTN3-206ENST00000497399 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
TCTN3-206ENST00000497399 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.34
TCTN3-206ENST00000497399 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
TCTN3-206ENST00000497399 MEGF6O75095 1541 aa12.95□□□□□ -0.34
TCTN3-206ENST00000497399 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
TCTN3-206ENST00000497399 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
TCTN3-206ENST00000497399 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
TCTN3-206ENST00000497399 MTHFSDQ2M296 383 aaKnown RBP12.94□□□□□ -0.34
TCTN3-206ENST00000497399 PROM2Q8N271 834 aa12.94□□□□□ -0.34
TCTN3-206ENST00000497399 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
TCTN3-206ENST00000497399 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
TCTN3-206ENST00000497399 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
TCTN3-206ENST00000497399 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
TCTN3-206ENST00000497399 NEFMP07197 916 aa12.93□□□□□ -0.34
TCTN3-206ENST00000497399 RIPK4P57078 832 aa12.93□□□□□ -0.34
TCTN3-206ENST00000497399 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
TCTN3-206ENST00000497399 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
TCTN3-206ENST00000497399 BCL9O00512 1426 aa12.92□□□□□ -0.34
TCTN3-206ENST00000497399 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
TCTN3-206ENST00000497399 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
TCTN3-206ENST00000497399 PLSCR1O15162 318 aa12.91□□□□□ -0.34
TCTN3-206ENST00000497399 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
TCTN3-206ENST00000497399 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
TCTN3-206ENST00000497399 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
TCTN3-206ENST00000497399 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
TCTN3-206ENST00000497399 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
TCTN3-206ENST00000497399 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
TCTN3-206ENST00000497399 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
TCTN3-206ENST00000497399 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
TCTN3-206ENST00000497399 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
TCTN3-206ENST00000497399 IL2RBP14784 551 aa12.89□□□□□ -0.35
TCTN3-206ENST00000497399 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
TCTN3-206ENST00000497399 CDCA7LQ96GN5 454 aa12.89□□□□□ -0.35
TCTN3-206ENST00000497399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.35
TCTN3-206ENST00000497399 BTAF1O14981 1849 aa12.89□□□□□ -0.35
TCTN3-206ENST00000497399 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
TCTN3-206ENST00000497399 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
TCTN3-206ENST00000497399 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
TCTN3-206ENST00000497399 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
TCTN3-206ENST00000497399 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
TCTN3-206ENST00000497399 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
TCTN3-206ENST00000497399 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
TCTN3-206ENST00000497399 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
TCTN3-206ENST00000497399 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
TCTN3-206ENST00000497399 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
TCTN3-206ENST00000497399 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
TCTN3-206ENST00000497399 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
TCTN3-206ENST00000497399 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 DDB1Q16531 1140 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
TCTN3-206ENST00000497399 MCM10Q7L590 875 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms