RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 EYA1Q99502 592 aa22.31■■□□□ 1.16
HCLS1-212ENST00000497391 SPG7Q9UQ90 795 aa22.31■■□□□ 1.16
HCLS1-212ENST00000497391 MTHFSP49914 203 aa22.29■■□□□ 1.16
HCLS1-212ENST00000497391 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
HCLS1-212ENST00000497391 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
HCLS1-212ENST00000497391 NCAPD2Q15021 1401 aa22.28■■□□□ 1.16
HCLS1-212ENST00000497391 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
HCLS1-212ENST00000497391 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.16
HCLS1-212ENST00000497391 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
HCLS1-212ENST00000497391 SBF2Q86WG5 1849 aa22.25■■□□□ 1.15
HCLS1-212ENST00000497391 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
HCLS1-212ENST00000497391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.25■■□□□ 1.15
HCLS1-212ENST00000497391 NHSQ6T4R5 1651 aa22.25■■□□□ 1.15
HCLS1-212ENST00000497391 PLSCR1O15162 318 aa22.24■■□□□ 1.15
HCLS1-212ENST00000497391 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
HCLS1-212ENST00000497391 CAMKK2Q96RR4 588 aa22.24■■□□□ 1.15
HCLS1-212ENST00000497391 NBPF14Q5TI25 921 aa22.23■■□□□ 1.15
HCLS1-212ENST00000497391 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
HCLS1-212ENST00000497391 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
HCLS1-212ENST00000497391 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
HCLS1-212ENST00000497391 PLEKHO1Q53GL0 409 aaPredicted RBP22.21■■□□□ 1.15
HCLS1-212ENST00000497391 PKD1L3Q7Z443 1732 aa22.2■■□□□ 1.14
HCLS1-212ENST00000497391 KCNQ2O43526 872 aa22.2■■□□□ 1.14
HCLS1-212ENST00000497391 IL13P35225 146 aa22.2■■□□□ 1.14
HCLS1-212ENST00000497391 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
HCLS1-212ENST00000497391 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
HCLS1-212ENST00000497391 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
HCLS1-212ENST00000497391 HSP90AB1P08238 724 aaKnown RBP22.18■■□□□ 1.14
HCLS1-212ENST00000497391 PRIM1P49642 420 aaKnown RBP22.18■■□□□ 1.14
HCLS1-212ENST00000497391 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
HCLS1-212ENST00000497391 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
HCLS1-212ENST00000497391 DOT1LQ8TEK3 1739 aa22.17■■□□□ 1.14
HCLS1-212ENST00000497391 U2SURPO15042 1029 aaKnown RBP22.17■■□□□ 1.14
HCLS1-212ENST00000497391 C1orf141Q5JVX7 400 aa22.17■■□□□ 1.14
HCLS1-212ENST00000497391 KAT6BQ8WYB5 2073 aa22.17■■□□□ 1.14
HCLS1-212ENST00000497391 CYP27B1O15528 508 aa22.16■■□□□ 1.14
HCLS1-212ENST00000497391 PTF1AQ7RTS3 328 aa22.16■■□□□ 1.14
HCLS1-212ENST00000497391 RREB1Q92766 1687 aa22.16■■□□□ 1.14
HCLS1-212ENST00000497391 KDRP35968 1356 aa22.15■■□□□ 1.14
HCLS1-212ENST00000497391 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
HCLS1-212ENST00000497391 HMGB2P26583 209 aaKnown RBP22.14■■□□□ 1.13
HCLS1-212ENST00000497391 ZNF530Q6P9A1 599 aaPredicted RBP22.14■■□□□ 1.13
HCLS1-212ENST00000497391 AEBP1Q8IUX7 1158 aa22.14■■□□□ 1.13
HCLS1-212ENST00000497391 BTAF1O14981 1849 aa22.14■■□□□ 1.13
HCLS1-212ENST00000497391 PHKG2P15735 406 aa22.13■■□□□ 1.13
HCLS1-212ENST00000497391 TXNRD1Q16881 649 aa22.13■■□□□ 1.13
HCLS1-212ENST00000497391 NKX1-1Q15270 411 aaPredicted RBP22.12■■□□□ 1.13
HCLS1-212ENST00000497391 RALBP1Q15311 655 aa22.12■■□□□ 1.13
HCLS1-212ENST00000497391 NUP188Q5SRE5 1749 aa22.11■■□□□ 1.13
HCLS1-212ENST00000497391 HMOX1P09601 288 aa22.11■■□□□ 1.13
HCLS1-212ENST00000497391 R3HDM1Q15032 1099 aaKnown RBP22.11■■□□□ 1.13
HCLS1-212ENST00000497391 SLC27A3Q5K4L6 730 aa22.11■■□□□ 1.13
HCLS1-212ENST00000497391 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
HCLS1-212ENST00000497391 PSDA5PKW4 1024 aaPredicted RBP22.1■■□□□ 1.13
HCLS1-212ENST00000497391 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
HCLS1-212ENST00000497391 STK32BQ9NY57 414 aa22.1■■□□□ 1.13
HCLS1-212ENST00000497391 TMOD3Q9NYL9 352 aa22.1■■□□□ 1.13
HCLS1-212ENST00000497391 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
HCLS1-212ENST00000497391 SMARCC1Q92922 1105 aaPredicted RBP22.09■■□□□ 1.13
HCLS1-212ENST00000497391 NEFMP07197 916 aa22.06■■□□□ 1.12
HCLS1-212ENST00000497391 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
HCLS1-212ENST00000497391 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
HCLS1-212ENST00000497391 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
HCLS1-212ENST00000497391 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
HCLS1-212ENST00000497391 AKAP4Q5JQC9 854 aa22.04■■□□□ 1.12
HCLS1-212ENST00000497391 PROM2Q8N271 834 aa22.04■■□□□ 1.12
HCLS1-212ENST00000497391 CCNL1Q9UK58 526 aaPredicted RBP22.04■■□□□ 1.12
HCLS1-212ENST00000497391 PALLDQ8WX93 1383 aa22.03■■□□□ 1.12
HCLS1-212ENST00000497391 CABP4P57796 275 aa22.03■■□□□ 1.12
HCLS1-212ENST00000497391 GAS2L2Q8NHY3 880 aa22.03■■□□□ 1.12
HCLS1-212ENST00000497391 TOGARAM1Q9Y4F4 1720 aa22.02■■□□□ 1.12
HCLS1-212ENST00000497391 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
HCLS1-212ENST00000497391 PIGBQ92521 554 aa22.01■■□□□ 1.11
HCLS1-212ENST00000497391 SLC15A2Q16348 729 aa22■■□□□ 1.11
HCLS1-212ENST00000497391 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
HCLS1-212ENST00000497391 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
HCLS1-212ENST00000497391 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
HCLS1-212ENST00000497391 ITGB4P16144 1822 aa21.99■■□□□ 1.11
HCLS1-212ENST00000497391 FCHSD2O94868 740 aa21.98■■□□□ 1.11
HCLS1-212ENST00000497391 MTHFSDQ2M296 383 aaKnown RBP21.97■■□□□ 1.11
HCLS1-212ENST00000497391 LY75O60449 1722 aa21.97■■□□□ 1.11
HCLS1-212ENST00000497391 KDM6AO15550 1401 aaPredicted RBP21.97■■□□□ 1.11
HCLS1-212ENST00000497391 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
HCLS1-212ENST00000497391 LRRC4BQ9NT99 713 aa21.96■■□□□ 1.11
HCLS1-212ENST00000497391 MAP3K5Q99683 1374 aa21.96■■□□□ 1.11
HCLS1-212ENST00000497391 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
HCLS1-212ENST00000497391 GNAT3A8MTJ3 354 aa21.94■■□□□ 1.1
HCLS1-212ENST00000497391 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
HCLS1-212ENST00000497391 SIK1P57059 783 aa21.93■■□□□ 1.1
HCLS1-212ENST00000497391 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
HCLS1-212ENST00000497391 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
HCLS1-212ENST00000497391 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
HCLS1-212ENST00000497391 MAPK8IP3Q9UPT6 1336 aa21.92■■□□□ 1.1
HCLS1-212ENST00000497391 RNMTO43148 476 aaKnown RBP21.92■■□□□ 1.1
HCLS1-212ENST00000497391 KCNQ4P56696 695 aa21.92■■□□□ 1.1
HCLS1-212ENST00000497391 TEFQ10587 303 aa21.92■■□□□ 1.1
HCLS1-212ENST00000497391 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
HCLS1-212ENST00000497391 SPON1Q9HCB6 807 aa21.92■■□□□ 1.1
HCLS1-212ENST00000497391 LRP5O75197 1615 aa21.91■■□□□ 1.1
HCLS1-212ENST00000497391 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms