RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ATAD2Q6PL18 1390 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 TRAPPC8Q9Y2L5 1435 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 ABCA10Q8WWZ4 1543 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FRMPD1Q5SYB0 1578 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 POTEIP0CG38 1075 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TCF3P15923 654 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FUT2Q10981 343 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 ECM1Q16610 540 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 MAP7D1Q3KQU3 841 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 CRTC2Q53ET0 693 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 MORN1Q5T089 497 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 COL13A1Q5TAT6 717 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TRAF7Q6Q0C0 670 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 LAPTM4BQ86VI4 370 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 SIX5Q8N196 739 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FAM174AQ8TBP5 190 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TNIKQ9UKE5 1360 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 AKNAQ7Z591 1439 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TCOF1Q13428 1488 aaKnown RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 HAX1O00165 279 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 PIK3CDO00329 1044 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 HOXB1P14653 301 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 OCLNQ16625 522 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 Q3C1V9 767 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 SWT1Q5T5J6 900 aaKnown RBP3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 DCBLD2Q96PD2 775 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 RGS12O14924 1447 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 FAM135BQ49AJ0 1406 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 PLA2R1Q13018 1463 aa3.84□□□□□ -1.8
CKS1BP2-201ENST00000497342 C6orf229H3BNL8 230 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 ACTN4O43707 911 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 NPR3P17342 541 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PTPRNQ16849 979 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 FAM98CQ17RN3 349 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PROX2Q3B8N5 592 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PDXDC2PQ6P474 469 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 LARGE2Q8N3Y3 721 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 FAM200AQ8TCP9 573 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 COL26A1Q96A83 441 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 OCSTAMPQ9BR26 566 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 CEP126Q9P2H0 1117 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 MKRN1Q9UHC7 482 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 RAPGEF2Q9Y4G8 1499 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZCCHC11Q5TAX3 1644 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 BCL9LQ86UU0 1499 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 M0R2N6 131 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 RECKO95980 971 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 ATP2B4P23634 1241 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 CDCA8Q53HL2 280 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 BRICD5Q6PL45 260 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 POTEHQ6S545 545 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 TNS4Q8IZW8 715 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 THAP11Q96EK4 314 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 ASB16Q96NS5 453 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 BCL2L13Q9BXK5 485 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 CXXC1Q9P0U4 656 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 KIAA1468Q9P260 1216 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 TOP2AP11388 1531 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CCDC88BA6NC98 1476 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 NEO1Q92859 1461 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 JCADQ9P266 1359 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 BHMG1C9JSJ3 638 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SMAPO00193 183 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZBTB7BO15156 539 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ICMTO60725 284 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CFHP08603 1231 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SKIP12755 728 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 RBM6P78332 1123 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CLDN10P78369 228 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 MRPL58Q14197 206 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 LARP1Q6PKG0 1096 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 TRIM50Q86XT4 487 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 PLPP7Q8NBV4 271 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SREK1Q8WXA9 508 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 DRC1Q96MC2 740 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 LRP6O75581 1613 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 FHOD3Q2V2M9 1422 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ANKRD33BA6NCL7 494 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 GIGYF1O75420 1035 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 POTEJP0CG39 1038 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SERPINB4P48594 390 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SLC4A3P48751 1232 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ATP1A2P50993 1020 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 NCOA4Q13772 614 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 KMT5BQ4FZB7 885 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 MSS51Q4VC12 460 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZNF326Q5BKZ1 582 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 MEX3CQ5U5Q3 659 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 RGL4Q8IZJ4 473 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ARMC2Q8NEN0 867 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SYMPKQ92797 1274 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 USB1Q9BQ65 265 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 PRR14Q9BWN1 585 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SLC27A5Q9Y2P5 690 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 VWDEQ8N2E2 1590 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SPATA31A6Q5VVP1 1343 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 C21orf2O43822 256 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms